RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
GYPB-202ENST00000502664 TAX1BP3O14907 124 aa1.67□□□□□ -2.14
GYPB-202ENST00000502664 UQCRQO14949 82 aa1.67□□□□□ -2.14
GYPB-202ENST00000502664 LINC00208Q96KT6 92 aa1.67□□□□□ -2.14
GYPB-202ENST00000502664 PRO0628Q9UI54 55 aa1.67□□□□□ -2.14
GYPB-202ENST00000502664 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
GYPB-202ENST00000502664 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
GYPB-202ENST00000502664 PRO0461Q9UI25 63 aa1.66□□□□□ -2.14
GYPB-202ENST00000502664 ATOX1O00244 68 aa1.65□□□□□ -2.15
GYPB-202ENST00000502664 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
GYPB-202ENST00000502664 DMAC1Q96GE9 116 aa1.65□□□□□ -2.15
GYPB-202ENST00000502664 C10orf95Q9H7T3 257 aa1.65□□□□□ -2.15
GYPB-202ENST00000502664 SPANXA2-OT1Q8N9U9 137 aa1.64□□□□□ -2.15
GYPB-202ENST00000502664 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
GYPB-202ENST00000502664 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
GYPB-202ENST00000502664 HIST1H4AP62805 103 aaKnown RBP1.6□□□□□ -2.15
GYPB-202ENST00000502664 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
GYPB-202ENST00000502664 ANAPC13Q9BS18 74 aa1.58□□□□□ -2.16
GYPB-202ENST00000502664 TRAV7A0A075B6U4 112 aa1.56□□□□□ -2.16
GYPB-202ENST00000502664 MP68P56378 58 aa1.56□□□□□ -2.16
GYPB-202ENST00000502664 ETDBQ3ZM63 59 aa1.56□□□□□ -2.16
GYPB-202ENST00000502664 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
GYPB-202ENST00000502664 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
GYPB-202ENST00000502664 SPINT4Q6UDR6 99 aa1.54□□□□□ -2.16
GYPB-202ENST00000502664 ACYP2P14621 99 aa1.53□□□□□ -2.16
GYPB-202ENST00000502664 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
GYPB-202ENST00000502664 SPATA8Q6RVD6 105 aa1.53□□□□□ -2.16
GYPB-202ENST00000502664 K7ERS5 55 aa1.52□□□□□ -2.17
GYPB-202ENST00000502664 ATP5EP2Q5VTU8 51 aa1.51□□□□□ -2.17
GYPB-202ENST00000502664 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
GYPB-202ENST00000502664 H3BPC8 53 aa1.5□□□□□ -2.17
GYPB-202ENST00000502664 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
GYPB-202ENST00000502664 CHKB-CPT1BH3BT56 60 aa1.49□□□□□ -2.17
GYPB-202ENST00000502664 SMIM6P0DI80 62 aa1.49□□□□□ -2.17
GYPB-202ENST00000502664 F8W1H4 67 aa1.48□□□□□ -2.17
GYPB-202ENST00000502664 MT1AP04731 61 aa1.48□□□□□ -2.17
GYPB-202ENST00000502664 TNP1P09430 55 aa1.48□□□□□ -2.17
GYPB-202ENST00000502664 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
GYPB-202ENST00000502664 A6NED7 52 aa1.47□□□□□ -2.17
GYPB-202ENST00000502664 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
GYPB-202ENST00000502664 KRTAP25-1Q3LHN0 102 aa1.45□□□□□ -2.18
GYPB-202ENST00000502664 COL5A1-AS1Q5SY13 56 aa1.45□□□□□ -2.18
GYPB-202ENST00000502664 LINC00643Q86TS7 51 aa1.45□□□□□ -2.18
GYPB-202ENST00000502664 GTF2H5Q6ZYL4 71 aa1.44□□□□□ -2.18
GYPB-202ENST00000502664 A0A1B0GU33 70 aa1.43□□□□□ -2.18
GYPB-202ENST00000502664 SCGB1A1P11684 91 aa1.39□□□□□ -2.19
GYPB-202ENST00000502664 SNURFQ9Y675 71 aa1.38□□□□□ -2.19
GYPB-202ENST00000502664 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
GYPB-202ENST00000502664 LOC105371267A0A1B0GV96 52 aa1.37□□□□□ -2.19
GYPB-202ENST00000502664 COA5Q86WW8 74 aa1.36□□□□□ -2.19
GYPB-202ENST00000502664 PMAIP1Q13794 54 aa1.33□□□□□ -2.2
GYPB-202ENST00000502664 A0A1B0GU69 56 aa1.26□□□□□ -2.21
GYPB-202ENST00000502664 SERP2Q8N6R1 65 aa1.26□□□□□ -2.21
GYPB-202ENST00000502664 SMIM20Q8N5G0 67 aa1.25□□□□□ -2.21
GYPB-202ENST00000502664 TMEM258P61165 79 aa1.2□□□□□ -2.22
GYPB-202ENST00000502664 KTN1-AS1Q86SY8 53 aa1.2□□□□□ -2.22
GYPB-202ENST00000502664 A0A1B0GV90 55 aa1.19□□□□□ -2.22
GYPB-202ENST00000502664 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
GYPB-202ENST00000502664 J3QR89 54 aa1.16□□□□□ -2.22
GYPB-202ENST00000502664 H7BZZ5 65 aa1.15□□□□□ -2.23
GYPB-202ENST00000502664 PRR15LQ9BU68 103 aa1.14□□□□□ -2.23
GYPB-202ENST00000502664 Q1T7F1 81 aa1.11□□□□□ -2.23
GYPB-202ENST00000502664 UQCR11O14957 56 aa1.08□□□□□ -2.24
GYPB-202ENST00000502664 LINC01558Q9Y6Z2 57 aa1.08□□□□□ -2.24
GYPB-202ENST00000502664 COX7CP15954 63 aa1.07□□□□□ -2.24
GYPB-202ENST00000502664 MIR22HGQ0VDD5 57 aa1.05□□□□□ -2.24
GYPB-202ENST00000502664 RPS28P62857 69 aaKnown RBP1.04□□□□□ -2.24
GYPB-202ENST00000502664 K7ERU9 68 aa1.01□□□□□ -2.25
GYPB-202ENST00000502664 ROMO1P60602 79 aa1□□□□□ -2.25
GYPB-202ENST00000502664 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
GYPB-202ENST00000502664 CCDC179H3BU77 68 aa0.94□□□□□ -2.26
GYPB-202ENST00000502664 INE1O15225 51 aa0.93□□□□□ -2.26
GYPB-202ENST00000502664 ATP5EP56381 51 aaPredicted RBP0.89□□□□□ -2.27
GYPB-202ENST00000502664 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
GYPB-202ENST00000502664 BRK1Q8WUW1 75 aa0.87□□□□□ -2.27
GYPB-202ENST00000502664 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
GYPB-202ENST00000502664 PRM1P04553 51 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 216.8 ms