RNA–Protein interactions for RNA: ENST00000499860.6

CD164-206, Transcript of CD164 molecule, humanhuman

TSL 1 (best)

Gene CD164, Length 2,845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-206ENST00000499860 Q6ZRN7 208 aaPredicted RBP1.17□□□□□ -2.22
CD164-206ENST00000499860 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
CD164-206ENST00000499860 COX6B2Q6YFQ2 88 aa1.16□□□□□ -2.22
CD164-206ENST00000499860 C10orf95Q9H7T3 257 aa1.16□□□□□ -2.22
CD164-206ENST00000499860 SPRR2DP22532 72 aa1.16□□□□□ -2.22
CD164-206ENST00000499860 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
CD164-206ENST00000499860 SPRR2EP22531 72 aa1.15□□□□□ -2.23
CD164-206ENST00000499860 MT3P25713 68 aa1.15□□□□□ -2.23
CD164-206ENST00000499860 SPRR2BP35325 72 aa1.15□□□□□ -2.23
CD164-206ENST00000499860 SPRR2AP35326 72 aa1.15□□□□□ -2.23
CD164-206ENST00000499860 UBE2DNLQ8IWF7 75 aa1.14□□□□□ -2.23
CD164-206ENST00000499860 A0A0D9SG42 100 aa1.13□□□□□ -2.23
CD164-206ENST00000499860 KRTAP13-4Q3LI77 160 aa1.13□□□□□ -2.23
CD164-206ENST00000499860 Q5VSD8 79 aa1.13□□□□□ -2.23
CD164-206ENST00000499860 KRTAP13-2Q52LG2 175 aa1.12□□□□□ -2.23
CD164-206ENST00000499860 S4R3F8 94 aa1.12□□□□□ -2.23
CD164-206ENST00000499860 KRTAP9-6A8MVA2 160 aa1.11□□□□□ -2.23
CD164-206ENST00000499860 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
CD164-206ENST00000499860 KRTAP12-2P59991 146 aa1.11□□□□□ -2.23
CD164-206ENST00000499860 KRTAP10-8P60410 259 aa1.1□□□□□ -2.23
CD164-206ENST00000499860 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
CD164-206ENST00000499860 KRTAP12-1P59990 96 aa1.09□□□□□ -2.24
CD164-206ENST00000499860 RPS29P62273 56 aaKnown RBP1.08□□□□□ -2.24
CD164-206ENST00000499860 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
CD164-206ENST00000499860 KRTAP10-1P60331 282 aa1.07□□□□□ -2.24
CD164-206ENST00000499860 CAMK2N1Q7Z7J9 78 aa1.07□□□□□ -2.24
CD164-206ENST00000499860 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
CD164-206ENST00000499860 M0QZ58 72 aa1.04□□□□□ -2.24
CD164-206ENST00000499860 PRO2289Q9P1D8 64 aa1.04□□□□□ -2.24
CD164-206ENST00000499860 PP632Q6XCG6 107 aa1.02□□□□□ -2.25
CD164-206ENST00000499860 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
CD164-206ENST00000499860 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CD164-206ENST00000499860 INE1O15225 51 aa0.99□□□□□ -2.25
CD164-206ENST00000499860 R4GN34 69 aa0.98□□□□□ -2.25
CD164-206ENST00000499860 SMR3BP02814 79 aaPredicted RBP0.98□□□□□ -2.25
CD164-206ENST00000499860 KRTAP19-2Q3LHN2 52 aa0.98□□□□□ -2.25
CD164-206ENST00000499860 MT1HP80294 61 aa0.94□□□□□ -2.26
CD164-206ENST00000499860 TNP1P09430 55 aa0.93□□□□□ -2.26
CD164-206ENST00000499860 LPAP08519 4548 aa0.92□□□□□ -2.26
CD164-206ENST00000499860 MT4P47944 62 aa0.92□□□□□ -2.26
CD164-206ENST00000499860 KRTAP10-5P60370 271 aa0.91□□□□□ -2.26
CD164-206ENST00000499860 KRTAP10-12P60413 245 aa0.89□□□□□ -2.27
CD164-206ENST00000499860 LCE3AQ5TA76 89 aa0.87□□□□□ -2.27
CD164-206ENST00000499860 KRTAP10-10P60014 251 aa0.86□□□□□ -2.27
CD164-206ENST00000499860 LCE1FQ5T754 118 aa0.86□□□□□ -2.27
CD164-206ENST00000499860 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
CD164-206ENST00000499860 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
CD164-206ENST00000499860 MT2AP02795 61 aa0.84□□□□□ -2.27
CD164-206ENST00000499860 KRTAP8-1Q8IUC2 63 aa0.84□□□□□ -2.28
CD164-206ENST00000499860 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
CD164-206ENST00000499860 KRTAP12-3P60328 96 aa0.82□□□□□ -2.28
CD164-206ENST00000499860 LCE1CQ5T751 118 aa0.81□□□□□ -2.28
CD164-206ENST00000499860 LCE1BQ5T7P3 118 aa0.81□□□□□ -2.28
CD164-206ENST00000499860 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
CD164-206ENST00000499860 MT1FP04733 61 aa0.8□□□□□ -2.28
CD164-206ENST00000499860 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
CD164-206ENST00000499860 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
CD164-206ENST00000499860 LCE3CQ5T5A8 94 aa0.78□□□□□ -2.28
CD164-206ENST00000499860 MT1XP80297 61 aa0.76□□□□□ -2.29
CD164-206ENST00000499860 MT1BP07438 61 aa0.75□□□□□ -2.29
CD164-206ENST00000499860 M0R2T5 61 aa0.75□□□□□ -2.29
CD164-206ENST00000499860 KRTAP19-5Q3LI72 72 aa0.74□□□□□ -2.29
CD164-206ENST00000499860 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
CD164-206ENST00000499860 KRTAP12-4P60329 112 aa0.71□□□□□ -2.3
CD164-206ENST00000499860 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
CD164-206ENST00000499860 LCE3EQ5T5B0 92 aa0.68□□□□□ -2.3
CD164-206ENST00000499860 MT1LQ93083 61 aa0.67□□□□□ -2.3
CD164-206ENST00000499860 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
CD164-206ENST00000499860 PRM1P04553 51 aa0.66□□□□□ -2.3
CD164-206ENST00000499860 MT1EP04732 61 aa0.65□□□□□ -2.31
CD164-206ENST00000499860 MT1GP13640 62 aa0.65□□□□□ -2.31
CD164-206ENST00000499860 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
CD164-206ENST00000499860 MT1AP04731 61 aa0.63□□□□□ -2.31
CD164-206ENST00000499860 MT1MQ8N339 61 aa0.62□□□□□ -2.31
CD164-206ENST00000499860 LCE3DQ9BYE3 92 aa0.62□□□□□ -2.31
CD164-206ENST00000499860 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
CD164-206ENST00000499860 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
CD164-206ENST00000499860 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms