RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
NUP50-219ENST00000497960 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
NUP50-219ENST00000497960 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
NUP50-219ENST00000497960 TNP1P09430 55 aa5.81□□□□□ -1.48
NUP50-219ENST00000497960 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
NUP50-219ENST00000497960 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
NUP50-219ENST00000497960 MT1EP04732 61 aa5.7□□□□□ -1.5
NUP50-219ENST00000497960 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
NUP50-219ENST00000497960 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
NUP50-219ENST00000497960 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
NUP50-219ENST00000497960 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
NUP50-219ENST00000497960 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
NUP50-219ENST00000497960 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
NUP50-219ENST00000497960 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
NUP50-219ENST00000497960 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
NUP50-219ENST00000497960 ROMO1P60602 79 aa5.6□□□□□ -1.51
NUP50-219ENST00000497960 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
NUP50-219ENST00000497960 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
NUP50-219ENST00000497960 MT1GP13640 62 aa5.54□□□□□ -1.52
NUP50-219ENST00000497960 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
NUP50-219ENST00000497960 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
NUP50-219ENST00000497960 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
NUP50-219ENST00000497960 MT1LQ93083 61 aa5.45□□□□□ -1.54
NUP50-219ENST00000497960 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
NUP50-219ENST00000497960 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
NUP50-219ENST00000497960 MT1MQ8N339 61 aa5.42□□□□□ -1.54
NUP50-219ENST00000497960 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
NUP50-219ENST00000497960 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
NUP50-219ENST00000497960 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
NUP50-219ENST00000497960 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
NUP50-219ENST00000497960 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
NUP50-219ENST00000497960 MT4P47944 62 aa5.21□□□□□ -1.58
NUP50-219ENST00000497960 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
NUP50-219ENST00000497960 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
NUP50-219ENST00000497960 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
NUP50-219ENST00000497960 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
NUP50-219ENST00000497960 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
NUP50-219ENST00000497960 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
NUP50-219ENST00000497960 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
NUP50-219ENST00000497960 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
NUP50-219ENST00000497960 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
NUP50-219ENST00000497960 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
NUP50-219ENST00000497960 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
NUP50-219ENST00000497960 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
NUP50-219ENST00000497960 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
NUP50-219ENST00000497960 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
NUP50-219ENST00000497960 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
NUP50-219ENST00000497960 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
NUP50-219ENST00000497960 MT1AP04731 61 aa4.65□□□□□ -1.67
NUP50-219ENST00000497960 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
NUP50-219ENST00000497960 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
NUP50-219ENST00000497960 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
NUP50-219ENST00000497960 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
NUP50-219ENST00000497960 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
NUP50-219ENST00000497960 MT3P25713 68 aa4.27□□□□□ -1.73
NUP50-219ENST00000497960 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
NUP50-219ENST00000497960 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
NUP50-219ENST00000497960 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
NUP50-219ENST00000497960 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
NUP50-219ENST00000497960 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
NUP50-219ENST00000497960 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
NUP50-219ENST00000497960 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
NUP50-219ENST00000497960 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
NUP50-219ENST00000497960 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
NUP50-219ENST00000497960 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
NUP50-219ENST00000497960 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
NUP50-219ENST00000497960 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
NUP50-219ENST00000497960 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
NUP50-219ENST00000497960 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
NUP50-219ENST00000497960 INE1O15225 51 aa3.42□□□□□ -1.86
NUP50-219ENST00000497960 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
NUP50-219ENST00000497960 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
NUP50-219ENST00000497960 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
NUP50-219ENST00000497960 PRM1P04553 51 aa2.9□□□□□ -1.95
NUP50-219ENST00000497960 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
NUP50-219ENST00000497960 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
NUP50-219ENST00000497960 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
NUP50-219ENST00000497960 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms