RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 MT1EP04732 61 aa0.35□□□□□ -2.35
VPS36-206ENST00000497149 DMDP11532 3685 aa0.35□□□□□ -2.35
VPS36-206ENST00000497149 LRP2P98164 4655 aa0.35□□□□□ -2.35
VPS36-206ENST00000497149 MUC17Q685J3 4493 aa0.34□□□□□ -2.35
VPS36-206ENST00000497149 XIRP2A4UGR9 3374 aa0.34□□□□□ -2.35
VPS36-206ENST00000497149 BOD1L1Q8NFC6 3051 aa0.34□□□□□ -2.36
VPS36-206ENST00000497149 USP34Q70CQ2 3546 aa0.33□□□□□ -2.36
VPS36-206ENST00000497149 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
VPS36-206ENST00000497149 GOLGB1Q14789 3259 aaKnown RBP0.33□□□□□ -2.36
VPS36-206ENST00000497149 MUC3AQ02505 3323 aa0.33□□□□□ -2.36
VPS36-206ENST00000497149 CSMD2Q7Z408 3487 aa0.32□□□□□ -2.36
VPS36-206ENST00000497149 ASPMQ8IZT6 3477 aa0.32□□□□□ -2.36
VPS36-206ENST00000497149 SPEGQ15772 3267 aa0.32□□□□□ -2.36
VPS36-206ENST00000497149 DCHS1Q96JQ0 3298 aa0.32□□□□□ -2.36
VPS36-206ENST00000497149 DNHD1Q96M86 4753 aa0.32□□□□□ -2.36
VPS36-206ENST00000497149 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 BRCA2P51587 3418 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 MT1LQ93083 61 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 BIRC6Q9NR09 4857 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 VPS13CQ709C8 3753 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 EP400Q96L91 3159 aa0.31□□□□□ -2.36
VPS36-206ENST00000497149 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
VPS36-206ENST00000497149 UTRNP46939 3433 aa0.29□□□□□ -2.36
VPS36-206ENST00000497149 CEP350Q5VT06 3117 aa0.29□□□□□ -2.36
VPS36-206ENST00000497149 HERC2O95714 4834 aa0.29□□□□□ -2.36
VPS36-206ENST00000497149 DEFB4AO15263 64 aa0.28□□□□□ -2.36
VPS36-206ENST00000497149 KMT2CQ8NEZ4 4911 aaKnown RBP0.28□□□□□ -2.36
VPS36-206ENST00000497149 MYO15AQ9UKN7 3530 aa0.28□□□□□ -2.36
VPS36-206ENST00000497149 CENPFP49454 3210 aa0.27□□□□□ -2.37
VPS36-206ENST00000497149 KMT2DO14686 5537 aa0.27□□□□□ -2.37
VPS36-206ENST00000497149 RYR3Q15413 4870 aa0.27□□□□□ -2.37
VPS36-206ENST00000497149 RYR2Q92736 4967 aa0.26□□□□□ -2.37
VPS36-206ENST00000497149 RYR1P21817 5038 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 VCANP13611 3396 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 EYSQ5T1H1 3165 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 MT1XP80297 61 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 PCNTO95613 3336 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
VPS36-206ENST00000497149 DNAH14Q0VDD8 3507 aa0.24□□□□□ -2.37
VPS36-206ENST00000497149 WDFY3Q8IZQ1 3526 aa0.24□□□□□ -2.37
VPS36-206ENST00000497149 RNF213Q63HN8 5207 aa0.24□□□□□ -2.37
VPS36-206ENST00000497149 UNC80Q8N2C7 3258 aa0.24□□□□□ -2.37
VPS36-206ENST00000497149 UBR4Q5T4S7 5183 aa0.24□□□□□ -2.37
VPS36-206ENST00000497149 PCLOQ9Y6V0 5065 aa0.23□□□□□ -2.37
VPS36-206ENST00000497149 HTN3P15516 51 aa0.23□□□□□ -2.37
VPS36-206ENST00000497149 VPS13AQ96RL7 3174 aa0.23□□□□□ -2.37
VPS36-206ENST00000497149 USH2AO75445 5202 aa0.22□□□□□ -2.37
VPS36-206ENST00000497149 CFAP47Q6ZTR5 3102 aa0.22□□□□□ -2.37
VPS36-206ENST00000497149 CDH23Q9H251 3354 aa0.22□□□□□ -2.37
VPS36-206ENST00000497149 HYDINQ4G0P3 5121 aa0.21□□□□□ -2.38
VPS36-206ENST00000497149 MUC2Q02817 5179 aa0.2□□□□□ -2.38
VPS36-206ENST00000497149 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
VPS36-206ENST00000497149 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
VPS36-206ENST00000497149 EPPK1P58107 5090 aaKnown RBP0.2□□□□□ -2.38
VPS36-206ENST00000497149 MUC12Q9UKN1 5478 aa0.19□□□□□ -2.38
VPS36-206ENST00000497149 KIAA1109Q2LD37 5005 aa0.19□□□□□ -2.38
VPS36-206ENST00000497149 ABCA13Q86UQ4 5058 aa0.15□□□□□ -2.38
VPS36-206ENST00000497149 KRTAP19-7Q3SYF9 63 aa0.15□□□□□ -2.39
VPS36-206ENST00000497149 MT2AP02795 61 aa0.14□□□□□ -2.39
VPS36-206ENST00000497149 MT1HL1P0DM35 61 aa0.14□□□□□ -2.39
VPS36-206ENST00000497149 MT1GP13640 62 aa0.13□□□□□ -2.39
VPS36-206ENST00000497149 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
VPS36-206ENST00000497149 MT1MQ8N339 61 aa0.13□□□□□ -2.39
VPS36-206ENST00000497149 KRTAP6-1Q3LI64 71 aa0.09□□□□□ -2.4
VPS36-206ENST00000497149 SYNE2Q8WXH0 6885 aaKnown RBP0.06□□□□□ -2.4
VPS36-206ENST00000497149 DSTQ03001 7570 aaKnown RBP0.06□□□□□ -2.4
VPS36-206ENST00000497149 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
VPS36-206ENST00000497149 FSIP2Q5CZC0 6907 aa0.06□□□□□ -2.4
VPS36-206ENST00000497149 MT4P47944 62 aa0.03□□□□□ -2.4
VPS36-206ENST00000497149 MACF1Q9UPN3 7388 aaKnown RBP0.03□□□□□ -2.41
VPS36-206ENST00000497149 NEBP20929 6669 aa0□□□□□ -2.41
VPS36-206ENST00000497149 MT1FP04733 61 aa0□□□□□ -2.41
VPS36-206ENST00000497149 MT1BP07438 61 aa0□□□□□ -2.41
VPS36-206ENST00000497149 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
VPS36-206ENST00000497149 KRTAP19-2Q3LHN2 52 aa-0.05□□□□□ -2.42
VPS36-206ENST00000497149 KRTAP20-1Q3LI63 56 aa-0.19□□□□□ -2.44
VPS36-206ENST00000497149 KRTAP19-6Q3LI70 58 aa-0.21□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 90.1 ms