RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
SRSF4-205ENST00000497015 A0A1B0GU33 70 aa4.04□□□□□ -1.76
SRSF4-205ENST00000497015 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
SRSF4-205ENST00000497015 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
SRSF4-205ENST00000497015 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
SRSF4-205ENST00000497015 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
SRSF4-205ENST00000497015 KRTAP12-2P59991 146 aa4□□□□□ -1.77
SRSF4-205ENST00000497015 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
SRSF4-205ENST00000497015 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
SRSF4-205ENST00000497015 TMEM258P61165 79 aa3.97□□□□□ -1.77
SRSF4-205ENST00000497015 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
SRSF4-205ENST00000497015 A0A1B0GU69 56 aa3.94□□□□□ -1.78
SRSF4-205ENST00000497015 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
SRSF4-205ENST00000497015 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
SRSF4-205ENST00000497015 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SRSF4-205ENST00000497015 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
SRSF4-205ENST00000497015 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
SRSF4-205ENST00000497015 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
SRSF4-205ENST00000497015 A0A0D9SG42 100 aa3.84□□□□□ -1.79
SRSF4-205ENST00000497015 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
SRSF4-205ENST00000497015 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
SRSF4-205ENST00000497015 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
SRSF4-205ENST00000497015 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
SRSF4-205ENST00000497015 MT4P47944 62 aa3.79□□□□□ -1.8
SRSF4-205ENST00000497015 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
SRSF4-205ENST00000497015 UQCR11O14957 56 aa3.77□□□□□ -1.81
SRSF4-205ENST00000497015 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
SRSF4-205ENST00000497015 Q1T7F1 81 aa3.72□□□□□ -1.81
SRSF4-205ENST00000497015 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
SRSF4-205ENST00000497015 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
SRSF4-205ENST00000497015 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
SRSF4-205ENST00000497015 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
SRSF4-205ENST00000497015 TNP1P09430 55 aa3.64□□□□□ -1.83
SRSF4-205ENST00000497015 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
SRSF4-205ENST00000497015 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
SRSF4-205ENST00000497015 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
SRSF4-205ENST00000497015 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
SRSF4-205ENST00000497015 MT1EP04732 61 aa3.62□□□□□ -1.83
SRSF4-205ENST00000497015 ROMO1P60602 79 aa3.56□□□□□ -1.84
SRSF4-205ENST00000497015 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
SRSF4-205ENST00000497015 MT1GP13640 62 aa3.52□□□□□ -1.85
SRSF4-205ENST00000497015 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
SRSF4-205ENST00000497015 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
SRSF4-205ENST00000497015 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
SRSF4-205ENST00000497015 MT1MQ8N339 61 aa3.48□□□□□ -1.85
SRSF4-205ENST00000497015 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
SRSF4-205ENST00000497015 MT1LQ93083 61 aa3.44□□□□□ -1.86
SRSF4-205ENST00000497015 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
SRSF4-205ENST00000497015 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
SRSF4-205ENST00000497015 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SRSF4-205ENST00000497015 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SRSF4-205ENST00000497015 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SRSF4-205ENST00000497015 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SRSF4-205ENST00000497015 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
SRSF4-205ENST00000497015 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
SRSF4-205ENST00000497015 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
SRSF4-205ENST00000497015 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SRSF4-205ENST00000497015 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
SRSF4-205ENST00000497015 INE1O15225 51 aa3.11□□□□□ -1.91
SRSF4-205ENST00000497015 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
SRSF4-205ENST00000497015 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
SRSF4-205ENST00000497015 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SRSF4-205ENST00000497015 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SRSF4-205ENST00000497015 MT1AP04731 61 aa2.95□□□□□ -1.94
SRSF4-205ENST00000497015 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SRSF4-205ENST00000497015 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
SRSF4-205ENST00000497015 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
SRSF4-205ENST00000497015 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
SRSF4-205ENST00000497015 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SRSF4-205ENST00000497015 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
SRSF4-205ENST00000497015 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
SRSF4-205ENST00000497015 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SRSF4-205ENST00000497015 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
SRSF4-205ENST00000497015 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SRSF4-205ENST00000497015 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SRSF4-205ENST00000497015 PRM1P04553 51 aa1.69□□□□□ -2.14
SRSF4-205ENST00000497015 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SRSF4-205ENST00000497015 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 105.9 ms