RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DNHD1Q96M86 4753 aa1.44□□□□□ -2.18
TRIM4-205ENST00000496896 TNP1P09430 55 aa1.44□□□□□ -2.18
TRIM4-205ENST00000496896 MYCBP2O75592 4640 aa1.4□□□□□ -2.18
TRIM4-205ENST00000496896 KRTAP19-2Q3LHN2 52 aa1.4□□□□□ -2.19
TRIM4-205ENST00000496896 RYR2Q92736 4967 aa1.38□□□□□ -2.19
TRIM4-205ENST00000496896 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
TRIM4-205ENST00000496896 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
TRIM4-205ENST00000496896 RYR1P21817 5038 aa1.35□□□□□ -2.19
TRIM4-205ENST00000496896 LRP2P98164 4655 aa1.35□□□□□ -2.19
TRIM4-205ENST00000496896 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.19
TRIM4-205ENST00000496896 INE1O15225 51 aa1.34□□□□□ -2.19
TRIM4-205ENST00000496896 LPAP08519 4548 aa1.34□□□□□ -2.2
TRIM4-205ENST00000496896 KMT2CQ8NEZ4 4911 aaKnown RBP1.33□□□□□ -2.2
TRIM4-205ENST00000496896 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
TRIM4-205ENST00000496896 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
TRIM4-205ENST00000496896 RYR3Q15413 4870 aa1.29□□□□□ -2.2
TRIM4-205ENST00000496896 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
TRIM4-205ENST00000496896 KIAA1109Q2LD37 5005 aa1.27□□□□□ -2.21
TRIM4-205ENST00000496896 M0R2T5 61 aa1.27□□□□□ -2.21
TRIM4-205ENST00000496896 MT1HP80294 61 aa1.25□□□□□ -2.21
TRIM4-205ENST00000496896 MT2AP02795 61 aa1.24□□□□□ -2.21
TRIM4-205ENST00000496896 HERC1Q15751 4861 aa1.24□□□□□ -2.21
TRIM4-205ENST00000496896 BIRC6Q9NR09 4857 aa1.23□□□□□ -2.21
TRIM4-205ENST00000496896 ABCA13Q86UQ4 5058 aa1.22□□□□□ -2.21
TRIM4-205ENST00000496896 MT1FP04733 61 aa1.22□□□□□ -2.21
TRIM4-205ENST00000496896 MT1XP80297 61 aa1.22□□□□□ -2.21
TRIM4-205ENST00000496896 MT1BP07438 61 aa1.21□□□□□ -2.22
TRIM4-205ENST00000496896 EPPK1P58107 5090 aaKnown RBP1.18□□□□□ -2.22
TRIM4-205ENST00000496896 HERC2O95714 4834 aa1.18□□□□□ -2.22
TRIM4-205ENST00000496896 MUC2Q02817 5179 aa1.15□□□□□ -2.23
TRIM4-205ENST00000496896 PCLOQ9Y6V0 5065 aa1.15□□□□□ -2.23
TRIM4-205ENST00000496896 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
TRIM4-205ENST00000496896 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
TRIM4-205ENST00000496896 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
TRIM4-205ENST00000496896 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
TRIM4-205ENST00000496896 HMCN2Q8NDA2 5059 aa1.14□□□□□ -2.23
TRIM4-205ENST00000496896 MT1EP04732 61 aa1.09□□□□□ -2.23
TRIM4-205ENST00000496896 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
TRIM4-205ENST00000496896 MT1LQ93083 61 aa1.08□□□□□ -2.24
TRIM4-205ENST00000496896 FAT4Q6V0I7 4981 aa1.07□□□□□ -2.24
TRIM4-205ENST00000496896 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
TRIM4-205ENST00000496896 UBR4Q5T4S7 5183 aa1.05□□□□□ -2.24
TRIM4-205ENST00000496896 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
TRIM4-205ENST00000496896 RNF213Q63HN8 5207 aa1.05□□□□□ -2.24
TRIM4-205ENST00000496896 KRTAP19-6Q3LI70 58 aa1.04□□□□□ -2.24
TRIM4-205ENST00000496896 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
TRIM4-205ENST00000496896 MT1GP13640 62 aa1.03□□□□□ -2.24
TRIM4-205ENST00000496896 MT1AP04731 61 aa1□□□□□ -2.25
TRIM4-205ENST00000496896 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
TRIM4-205ENST00000496896 MT1MQ8N339 61 aa0.99□□□□□ -2.25
TRIM4-205ENST00000496896 KMT2DO14686 5537 aa0.92□□□□□ -2.26
TRIM4-205ENST00000496896 USH2AO75445 5202 aa0.92□□□□□ -2.26
TRIM4-205ENST00000496896 SSPOA2VEC9 5147 aa0.92□□□□□ -2.26
TRIM4-205ENST00000496896 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
TRIM4-205ENST00000496896 SPRR2AP35326 72 aa0.87□□□□□ -2.27
TRIM4-205ENST00000496896 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
TRIM4-205ENST00000496896 PRM1P04553 51 aa0.85□□□□□ -2.27
TRIM4-205ENST00000496896 SPRR2EP22531 72 aa0.82□□□□□ -2.28
TRIM4-205ENST00000496896 SPRR2BP35325 72 aa0.82□□□□□ -2.28
TRIM4-205ENST00000496896 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
TRIM4-205ENST00000496896 MUC12Q9UKN1 5478 aa0.79□□□□□ -2.28
TRIM4-205ENST00000496896 SPRR2DP22532 72 aa0.78□□□□□ -2.28
TRIM4-205ENST00000496896 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
TRIM4-205ENST00000496896 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
TRIM4-205ENST00000496896 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
TRIM4-205ENST00000496896 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
TRIM4-205ENST00000496896 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
TRIM4-205ENST00000496896 KRTAP20-1Q3LI63 56 aa0.69□□□□□ -2.3
TRIM4-205ENST00000496896 MACF1Q9UPN3 7388 aaKnown RBP0.65□□□□□ -2.31
TRIM4-205ENST00000496896 MT4P47944 62 aa0.64□□□□□ -2.31
TRIM4-205ENST00000496896 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
TRIM4-205ENST00000496896 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
TRIM4-205ENST00000496896 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
TRIM4-205ENST00000496896 SYNE2Q8WXH0 6885 aaKnown RBP0.56□□□□□ -2.32
TRIM4-205ENST00000496896 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
TRIM4-205ENST00000496896 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
TRIM4-205ENST00000496896 NEBP20929 6669 aa0.5□□□□□ -2.33
TRIM4-205ENST00000496896 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 88.6 ms