RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 HIST1H4AP62805 103 aaKnown RBP2.76□□□□□ -1.97
GARNL3-219ENST00000495172 MT-ATP8P03928 68 aa2.74□□□□□ -1.97
GARNL3-219ENST00000495172 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
GARNL3-219ENST00000495172 CYP4F30PQ9H0H9 118 aa2.7□□□□□ -1.98
GARNL3-219ENST00000495172 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
GARNL3-219ENST00000495172 SCGB1A1P11684 91 aa2.68□□□□□ -1.98
GARNL3-219ENST00000495172 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
GARNL3-219ENST00000495172 UQCRQO14949 82 aa2.67□□□□□ -1.98
GARNL3-219ENST00000495172 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
GARNL3-219ENST00000495172 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
GARNL3-219ENST00000495172 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
GARNL3-219ENST00000495172 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
GARNL3-219ENST00000495172 TRAV22A0A0B4J277 110 aa2.65□□□□□ -1.99
GARNL3-219ENST00000495172 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GARNL3-219ENST00000495172 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
GARNL3-219ENST00000495172 A8MU10 97 aa2.64□□□□□ -1.99
GARNL3-219ENST00000495172 H0Y9P7 68 aa2.64□□□□□ -1.99
GARNL3-219ENST00000495172 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
GARNL3-219ENST00000495172 ATOX1O00244 68 aa2.63□□□□□ -1.99
GARNL3-219ENST00000495172 LOC101927531A0A1B0GV80 90 aa2.62□□□□□ -1.99
GARNL3-219ENST00000495172 MP68P56378 58 aa2.62□□□□□ -1.99
GARNL3-219ENST00000495172 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
GARNL3-219ENST00000495172 LINC00208Q96KT6 92 aa2.62□□□□□ -1.99
GARNL3-219ENST00000495172 H3BPC8 53 aa2.6□□□□□ -1.99
GARNL3-219ENST00000495172 SERP2Q8N6R1 65 aa2.6□□□□□ -1.99
GARNL3-219ENST00000495172 COX7CP15954 63 aa2.57□□□□□ -2
GARNL3-219ENST00000495172 SNURFQ9Y675 71 aa2.57□□□□□ -2
GARNL3-219ENST00000495172 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
GARNL3-219ENST00000495172 MT1AP04731 61 aa2.52□□□□□ -2.01
GARNL3-219ENST00000495172 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
GARNL3-219ENST00000495172 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
GARNL3-219ENST00000495172 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
GARNL3-219ENST00000495172 H7BZZ5 65 aa2.49□□□□□ -2.01
GARNL3-219ENST00000495172 SPANXA2-OT1Q8N9U9 137 aa2.49□□□□□ -2.01
GARNL3-219ENST00000495172 ACYP2P14621 99 aa2.48□□□□□ -2.01
GARNL3-219ENST00000495172 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
GARNL3-219ENST00000495172 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
GARNL3-219ENST00000495172 COA5Q86WW8 74 aa2.42□□□□□ -2.02
GARNL3-219ENST00000495172 TMEM258P61165 79 aa2.41□□□□□ -2.02
GARNL3-219ENST00000495172 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
GARNL3-219ENST00000495172 ATP5EP56381 51 aaPredicted RBP2.4□□□□□ -2.03
GARNL3-219ENST00000495172 SPTSSBQ8NFR3 76 aa2.4□□□□□ -2.03
GARNL3-219ENST00000495172 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
GARNL3-219ENST00000495172 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
GARNL3-219ENST00000495172 SEC61GP60059 68 aa2.32□□□□□ -2.04
GARNL3-219ENST00000495172 A0A1B0GU69 56 aa2.29□□□□□ -2.04
GARNL3-219ENST00000495172 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
GARNL3-219ENST00000495172 LINC01558Q9Y6Z2 57 aa2.29□□□□□ -2.04
GARNL3-219ENST00000495172 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
GARNL3-219ENST00000495172 SMIM26A0A096LP01 95 aa2.26□□□□□ -2.05
GARNL3-219ENST00000495172 A0A1B0GU33 70 aa2.26□□□□□ -2.05
GARNL3-219ENST00000495172 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
GARNL3-219ENST00000495172 Q1T7F1 81 aa2.24□□□□□ -2.05
GARNL3-219ENST00000495172 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
GARNL3-219ENST00000495172 V9GYY9 64 aa2.24□□□□□ -2.05
GARNL3-219ENST00000495172 PSPHP1O15172 72 aa2.22□□□□□ -2.05
GARNL3-219ENST00000495172 UQCR11O14957 56 aa2.2□□□□□ -2.06
GARNL3-219ENST00000495172 TNP1P09430 55 aa2.2□□□□□ -2.06
GARNL3-219ENST00000495172 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
GARNL3-219ENST00000495172 MIR22HGQ0VDD5 57 aa2.16□□□□□ -2.06
GARNL3-219ENST00000495172 A6NED7 52 aa2.15□□□□□ -2.07
GARNL3-219ENST00000495172 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
GARNL3-219ENST00000495172 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
GARNL3-219ENST00000495172 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
GARNL3-219ENST00000495172 K7ERS5 55 aa2.08□□□□□ -2.08
GARNL3-219ENST00000495172 CDC42SE1Q9NRR8 79 aa2.08□□□□□ -2.08
GARNL3-219ENST00000495172 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
GARNL3-219ENST00000495172 ROMO1P60602 79 aa1.98□□□□□ -2.09
GARNL3-219ENST00000495172 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
GARNL3-219ENST00000495172 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
GARNL3-219ENST00000495172 PRO0628Q9UI54 55 aa1.91□□□□□ -2.1
GARNL3-219ENST00000495172 KTN1-AS1Q86SY8 53 aa1.79□□□□□ -2.12
GARNL3-219ENST00000495172 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
GARNL3-219ENST00000495172 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
GARNL3-219ENST00000495172 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
GARNL3-219ENST00000495172 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
GARNL3-219ENST00000495172 INE1O15225 51 aa1.12□□□□□ -2.23
GARNL3-219ENST00000495172 PRM1P04553 51 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 62.9 ms