RNA–Protein interactions for RNA: ENST00000494926.5

TM2D1-210, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-210ENST00000494926 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
TM2D1-210ENST00000494926 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
TM2D1-210ENST00000494926 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
TM2D1-210ENST00000494926 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
TM2D1-210ENST00000494926 CCDC179H3BU77 68 aa4□□□□□ -1.77
TM2D1-210ENST00000494926 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
TM2D1-210ENST00000494926 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
TM2D1-210ENST00000494926 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
TM2D1-210ENST00000494926 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
TM2D1-210ENST00000494926 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
TM2D1-210ENST00000494926 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
TM2D1-210ENST00000494926 ATP5EP56381 51 aaPredicted RBP3.89□□□□□ -1.79
TM2D1-210ENST00000494926 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
TM2D1-210ENST00000494926 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
TM2D1-210ENST00000494926 UQCR11O14957 56 aa3.81□□□□□ -1.8
TM2D1-210ENST00000494926 TMEM258P61165 79 aa3.77□□□□□ -1.81
TM2D1-210ENST00000494926 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
TM2D1-210ENST00000494926 MIR22HGQ0VDD5 57 aa3.75□□□□□ -1.81
TM2D1-210ENST00000494926 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
TM2D1-210ENST00000494926 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
TM2D1-210ENST00000494926 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
TM2D1-210ENST00000494926 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
TM2D1-210ENST00000494926 PSPHP1O15172 72 aa3.68□□□□□ -1.82
TM2D1-210ENST00000494926 K7ERS5 55 aa3.67□□□□□ -1.82
TM2D1-210ENST00000494926 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
TM2D1-210ENST00000494926 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
TM2D1-210ENST00000494926 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
TM2D1-210ENST00000494926 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
TM2D1-210ENST00000494926 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
TM2D1-210ENST00000494926 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
TM2D1-210ENST00000494926 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
TM2D1-210ENST00000494926 V9GYY9 64 aa3.54□□□□□ -1.84
TM2D1-210ENST00000494926 A6NED7 52 aa3.53□□□□□ -1.84
TM2D1-210ENST00000494926 Q1T7F1 81 aa3.53□□□□□ -1.84
TM2D1-210ENST00000494926 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
TM2D1-210ENST00000494926 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TM2D1-210ENST00000494926 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
TM2D1-210ENST00000494926 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
TM2D1-210ENST00000494926 MT1AP04731 61 aa3.48□□□□□ -1.85
TM2D1-210ENST00000494926 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
TM2D1-210ENST00000494926 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
TM2D1-210ENST00000494926 ROMO1P60602 79 aa3.42□□□□□ -1.86
TM2D1-210ENST00000494926 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
TM2D1-210ENST00000494926 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
TM2D1-210ENST00000494926 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TM2D1-210ENST00000494926 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
TM2D1-210ENST00000494926 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
TM2D1-210ENST00000494926 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
TM2D1-210ENST00000494926 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TM2D1-210ENST00000494926 PCP4P48539 62 aa3.18□□□□□ -1.9
TM2D1-210ENST00000494926 MT3P25713 68 aa3.16□□□□□ -1.9
TM2D1-210ENST00000494926 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
TM2D1-210ENST00000494926 H3BS24 57 aa3.08□□□□□ -1.92
TM2D1-210ENST00000494926 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
TM2D1-210ENST00000494926 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
TM2D1-210ENST00000494926 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
TM2D1-210ENST00000494926 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
TM2D1-210ENST00000494926 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
TM2D1-210ENST00000494926 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
TM2D1-210ENST00000494926 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
TM2D1-210ENST00000494926 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
TM2D1-210ENST00000494926 PRO0628Q9UI54 55 aa2.55□□□□□ -2
TM2D1-210ENST00000494926 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
TM2D1-210ENST00000494926 SVIPQ8NHG7 77 aa2.45□□□□□ -2.02
TM2D1-210ENST00000494926 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
TM2D1-210ENST00000494926 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
TM2D1-210ENST00000494926 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
TM2D1-210ENST00000494926 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
TM2D1-210ENST00000494926 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
TM2D1-210ENST00000494926 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
TM2D1-210ENST00000494926 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
TM2D1-210ENST00000494926 A0A0A0MQY5 61 aa2.12□□□□□ -2.07
TM2D1-210ENST00000494926 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
TM2D1-210ENST00000494926 NDUFAF8A1L188 74 aa1.83□□□□□ -2.12
TM2D1-210ENST00000494926 PRM1P04553 51 aa1.79□□□□□ -2.12
TM2D1-210ENST00000494926 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TM2D1-210ENST00000494926 INE1O15225 51 aa1.54□□□□□ -2.16
TM2D1-210ENST00000494926 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms