RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 KRTAP13-4Q3LI77 160 aa2.71□□□□□ -1.98
BRD9-211ENST00000494422 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
BRD9-211ENST00000494422 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
BRD9-211ENST00000494422 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
BRD9-211ENST00000494422 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
BRD9-211ENST00000494422 A0A0D9SG42 100 aa2.66□□□□□ -1.98
BRD9-211ENST00000494422 MT3P25713 68 aa2.66□□□□□ -1.98
BRD9-211ENST00000494422 MT1XP80297 61 aa2.65□□□□□ -1.99
BRD9-211ENST00000494422 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
BRD9-211ENST00000494422 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
BRD9-211ENST00000494422 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
BRD9-211ENST00000494422 A8MU10 97 aa2.61□□□□□ -1.99
BRD9-211ENST00000494422 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
BRD9-211ENST00000494422 KRTAP10-12P60413 245 aa2.56□□□□□ -2
BRD9-211ENST00000494422 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
BRD9-211ENST00000494422 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
BRD9-211ENST00000494422 TNP1P09430 55 aa2.53□□□□□ -2
BRD9-211ENST00000494422 KRTAP8-1Q8IUC2 63 aa2.51□□□□□ -2.01
BRD9-211ENST00000494422 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
BRD9-211ENST00000494422 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
BRD9-211ENST00000494422 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
BRD9-211ENST00000494422 KMT2DO14686 5537 aa2.47□□□□□ -2.01
BRD9-211ENST00000494422 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
BRD9-211ENST00000494422 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
BRD9-211ENST00000494422 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
BRD9-211ENST00000494422 INE1O15225 51 aa2.41□□□□□ -2.02
BRD9-211ENST00000494422 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
BRD9-211ENST00000494422 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
BRD9-211ENST00000494422 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
BRD9-211ENST00000494422 SPRR2EP22531 72 aa2.37□□□□□ -2.03
BRD9-211ENST00000494422 SPRR2BP35325 72 aa2.37□□□□□ -2.03
BRD9-211ENST00000494422 SPRR2AP35326 72 aa2.37□□□□□ -2.03
BRD9-211ENST00000494422 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
BRD9-211ENST00000494422 NEBP20929 6669 aa2.36□□□□□ -2.03
BRD9-211ENST00000494422 MT1EP04732 61 aa2.35□□□□□ -2.03
BRD9-211ENST00000494422 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
BRD9-211ENST00000494422 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
BRD9-211ENST00000494422 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
BRD9-211ENST00000494422 MT1GP13640 62 aa2.32□□□□□ -2.04
BRD9-211ENST00000494422 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
BRD9-211ENST00000494422 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
BRD9-211ENST00000494422 SPRR2DP22532 72 aa2.29□□□□□ -2.04
BRD9-211ENST00000494422 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
BRD9-211ENST00000494422 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
BRD9-211ENST00000494422 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
BRD9-211ENST00000494422 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
BRD9-211ENST00000494422 MT1LQ93083 61 aa2.27□□□□□ -2.05
BRD9-211ENST00000494422 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
BRD9-211ENST00000494422 MT1MQ8N339 61 aa2.23□□□□□ -2.05
BRD9-211ENST00000494422 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
BRD9-211ENST00000494422 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
BRD9-211ENST00000494422 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
BRD9-211ENST00000494422 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
BRD9-211ENST00000494422 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
BRD9-211ENST00000494422 MT1AP04731 61 aa1.96□□□□□ -2.1
BRD9-211ENST00000494422 MT4P47944 62 aa1.95□□□□□ -2.1
BRD9-211ENST00000494422 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
BRD9-211ENST00000494422 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
BRD9-211ENST00000494422 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
BRD9-211ENST00000494422 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
BRD9-211ENST00000494422 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
BRD9-211ENST00000494422 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
BRD9-211ENST00000494422 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
BRD9-211ENST00000494422 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
BRD9-211ENST00000494422 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
BRD9-211ENST00000494422 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
BRD9-211ENST00000494422 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
BRD9-211ENST00000494422 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
BRD9-211ENST00000494422 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
BRD9-211ENST00000494422 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
BRD9-211ENST00000494422 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
BRD9-211ENST00000494422 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
BRD9-211ENST00000494422 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
BRD9-211ENST00000494422 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
BRD9-211ENST00000494422 PRM1P04553 51 aa1.22□□□□□ -2.21
BRD9-211ENST00000494422 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
BRD9-211ENST00000494422 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
BRD9-211ENST00000494422 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms