RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
HSPG2-212ENST00000493940 A6NED7 52 aa4.53□□□□□ -1.68
HSPG2-212ENST00000493940 MT1GP13640 62 aa4.52□□□□□ -1.69
HSPG2-212ENST00000493940 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
HSPG2-212ENST00000493940 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
HSPG2-212ENST00000493940 MT1LQ93083 61 aa4.5□□□□□ -1.69
HSPG2-212ENST00000493940 MT1MQ8N339 61 aa4.49□□□□□ -1.69
HSPG2-212ENST00000493940 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
HSPG2-212ENST00000493940 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
HSPG2-212ENST00000493940 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
HSPG2-212ENST00000493940 K7ERS5 55 aa4.42□□□□□ -1.7
HSPG2-212ENST00000493940 TNP1P09430 55 aa4.4□□□□□ -1.71
HSPG2-212ENST00000493940 MT4P47944 62 aa4.4□□□□□ -1.71
HSPG2-212ENST00000493940 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
HSPG2-212ENST00000493940 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
HSPG2-212ENST00000493940 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
HSPG2-212ENST00000493940 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
HSPG2-212ENST00000493940 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
HSPG2-212ENST00000493940 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
HSPG2-212ENST00000493940 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
HSPG2-212ENST00000493940 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
HSPG2-212ENST00000493940 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
HSPG2-212ENST00000493940 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
HSPG2-212ENST00000493940 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HSPG2-212ENST00000493940 ROMO1P60602 79 aa4.16□□□□□ -1.74
HSPG2-212ENST00000493940 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
HSPG2-212ENST00000493940 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
HSPG2-212ENST00000493940 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
HSPG2-212ENST00000493940 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
HSPG2-212ENST00000493940 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
HSPG2-212ENST00000493940 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
HSPG2-212ENST00000493940 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
HSPG2-212ENST00000493940 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
HSPG2-212ENST00000493940 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HSPG2-212ENST00000493940 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
HSPG2-212ENST00000493940 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
HSPG2-212ENST00000493940 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
HSPG2-212ENST00000493940 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
HSPG2-212ENST00000493940 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
HSPG2-212ENST00000493940 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
HSPG2-212ENST00000493940 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
HSPG2-212ENST00000493940 MT1AP04731 61 aa3.8□□□□□ -1.8
HSPG2-212ENST00000493940 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
HSPG2-212ENST00000493940 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
HSPG2-212ENST00000493940 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
HSPG2-212ENST00000493940 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
HSPG2-212ENST00000493940 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
HSPG2-212ENST00000493940 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
HSPG2-212ENST00000493940 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
HSPG2-212ENST00000493940 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
HSPG2-212ENST00000493940 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
HSPG2-212ENST00000493940 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
HSPG2-212ENST00000493940 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
HSPG2-212ENST00000493940 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
HSPG2-212ENST00000493940 MT3P25713 68 aa3.44□□□□□ -1.86
HSPG2-212ENST00000493940 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
HSPG2-212ENST00000493940 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
HSPG2-212ENST00000493940 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
HSPG2-212ENST00000493940 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
HSPG2-212ENST00000493940 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
HSPG2-212ENST00000493940 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
HSPG2-212ENST00000493940 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
HSPG2-212ENST00000493940 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
HSPG2-212ENST00000493940 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
HSPG2-212ENST00000493940 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
HSPG2-212ENST00000493940 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
HSPG2-212ENST00000493940 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
HSPG2-212ENST00000493940 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
HSPG2-212ENST00000493940 PHGR1C9JFL3 82 aa2.55□□□□□ -2
HSPG2-212ENST00000493940 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
HSPG2-212ENST00000493940 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
HSPG2-212ENST00000493940 INE1O15225 51 aa2.39□□□□□ -2.03
HSPG2-212ENST00000493940 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
HSPG2-212ENST00000493940 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HSPG2-212ENST00000493940 PRM1P04553 51 aa2.15□□□□□ -2.07
HSPG2-212ENST00000493940 H3BS24 57 aa2.09□□□□□ -2.07
HSPG2-212ENST00000493940 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
HSPG2-212ENST00000493940 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 118.9 ms