RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
TRIM50-204ENST00000493498 TNP1P09430 55 aa5.34□□□□□ -1.55
TRIM50-204ENST00000493498 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
TRIM50-204ENST00000493498 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
TRIM50-204ENST00000493498 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
TRIM50-204ENST00000493498 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
TRIM50-204ENST00000493498 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
TRIM50-204ENST00000493498 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
TRIM50-204ENST00000493498 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
TRIM50-204ENST00000493498 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
TRIM50-204ENST00000493498 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
TRIM50-204ENST00000493498 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
TRIM50-204ENST00000493498 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
TRIM50-204ENST00000493498 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
TRIM50-204ENST00000493498 MT1EP04732 61 aa5.02□□□□□ -1.61
TRIM50-204ENST00000493498 MT1GP13640 62 aa4.93□□□□□ -1.62
TRIM50-204ENST00000493498 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
TRIM50-204ENST00000493498 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
TRIM50-204ENST00000493498 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
TRIM50-204ENST00000493498 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
TRIM50-204ENST00000493498 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
TRIM50-204ENST00000493498 MT4P47944 62 aa4.83□□□□□ -1.64
TRIM50-204ENST00000493498 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
TRIM50-204ENST00000493498 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
TRIM50-204ENST00000493498 MT1MQ8N339 61 aa4.8□□□□□ -1.64
TRIM50-204ENST00000493498 MT1LQ93083 61 aa4.75□□□□□ -1.65
TRIM50-204ENST00000493498 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
TRIM50-204ENST00000493498 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
TRIM50-204ENST00000493498 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
TRIM50-204ENST00000493498 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
TRIM50-204ENST00000493498 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
TRIM50-204ENST00000493498 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TRIM50-204ENST00000493498 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
TRIM50-204ENST00000493498 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
TRIM50-204ENST00000493498 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
TRIM50-204ENST00000493498 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
TRIM50-204ENST00000493498 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
TRIM50-204ENST00000493498 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
TRIM50-204ENST00000493498 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
TRIM50-204ENST00000493498 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
TRIM50-204ENST00000493498 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
TRIM50-204ENST00000493498 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
TRIM50-204ENST00000493498 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
TRIM50-204ENST00000493498 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
TRIM50-204ENST00000493498 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
TRIM50-204ENST00000493498 MT1AP04731 61 aa4.06□□□□□ -1.76
TRIM50-204ENST00000493498 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
TRIM50-204ENST00000493498 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
TRIM50-204ENST00000493498 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
TRIM50-204ENST00000493498 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
TRIM50-204ENST00000493498 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
TRIM50-204ENST00000493498 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
TRIM50-204ENST00000493498 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
TRIM50-204ENST00000493498 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
TRIM50-204ENST00000493498 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
TRIM50-204ENST00000493498 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
TRIM50-204ENST00000493498 MT3P25713 68 aa3.75□□□□□ -1.81
TRIM50-204ENST00000493498 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
TRIM50-204ENST00000493498 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
TRIM50-204ENST00000493498 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
TRIM50-204ENST00000493498 H3BS24 57 aa3.44□□□□□ -1.86
TRIM50-204ENST00000493498 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
TRIM50-204ENST00000493498 INE1O15225 51 aa3.39□□□□□ -1.87
TRIM50-204ENST00000493498 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TRIM50-204ENST00000493498 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
TRIM50-204ENST00000493498 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
TRIM50-204ENST00000493498 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
TRIM50-204ENST00000493498 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
TRIM50-204ENST00000493498 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
TRIM50-204ENST00000493498 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
TRIM50-204ENST00000493498 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
TRIM50-204ENST00000493498 PRM1P04553 51 aa2.78□□□□□ -1.96
TRIM50-204ENST00000493498 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
TRIM50-204ENST00000493498 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
TRIM50-204ENST00000493498 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
TRIM50-204ENST00000493498 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
TRIM50-204ENST00000493498 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
TRIM50-204ENST00000493498 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms