RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
RER1-208ENST00000493207 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
RER1-208ENST00000493207 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
RER1-208ENST00000493207 ROMO1P60602 79 aa6.07□□□□□ -1.44
RER1-208ENST00000493207 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
RER1-208ENST00000493207 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
RER1-208ENST00000493207 MT1LQ93083 61 aa6.02□□□□□ -1.45
RER1-208ENST00000493207 MT1GP13640 62 aa6□□□□□ -1.45
RER1-208ENST00000493207 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
RER1-208ENST00000493207 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
RER1-208ENST00000493207 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
RER1-208ENST00000493207 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
RER1-208ENST00000493207 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
RER1-208ENST00000493207 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
RER1-208ENST00000493207 MT1MQ8N339 61 aa5.92□□□□□ -1.46
RER1-208ENST00000493207 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
RER1-208ENST00000493207 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
RER1-208ENST00000493207 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
RER1-208ENST00000493207 H3BS24 57 aa5.79□□□□□ -1.48
RER1-208ENST00000493207 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
RER1-208ENST00000493207 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
RER1-208ENST00000493207 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
RER1-208ENST00000493207 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
RER1-208ENST00000493207 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
RER1-208ENST00000493207 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
RER1-208ENST00000493207 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
RER1-208ENST00000493207 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
RER1-208ENST00000493207 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
RER1-208ENST00000493207 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
RER1-208ENST00000493207 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
RER1-208ENST00000493207 MT4P47944 62 aa5.4□□□□□ -1.54
RER1-208ENST00000493207 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
RER1-208ENST00000493207 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
RER1-208ENST00000493207 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
RER1-208ENST00000493207 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
RER1-208ENST00000493207 HMCN1Q96RW7 5635 aa5.26□□□□□ -1.57
RER1-208ENST00000493207 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
RER1-208ENST00000493207 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
RER1-208ENST00000493207 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
RER1-208ENST00000493207 MT1AP04731 61 aa5.12□□□□□ -1.59
RER1-208ENST00000493207 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
RER1-208ENST00000493207 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
RER1-208ENST00000493207 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
RER1-208ENST00000493207 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
RER1-208ENST00000493207 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
RER1-208ENST00000493207 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
RER1-208ENST00000493207 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
RER1-208ENST00000493207 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.62
RER1-208ENST00000493207 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
RER1-208ENST00000493207 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
RER1-208ENST00000493207 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
RER1-208ENST00000493207 MT3P25713 68 aa4.67□□□□□ -1.66
RER1-208ENST00000493207 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
RER1-208ENST00000493207 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
RER1-208ENST00000493207 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
RER1-208ENST00000493207 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
RER1-208ENST00000493207 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
RER1-208ENST00000493207 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
RER1-208ENST00000493207 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
RER1-208ENST00000493207 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
RER1-208ENST00000493207 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
RER1-208ENST00000493207 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
RER1-208ENST00000493207 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
RER1-208ENST00000493207 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
RER1-208ENST00000493207 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
RER1-208ENST00000493207 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
RER1-208ENST00000493207 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
RER1-208ENST00000493207 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
RER1-208ENST00000493207 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
RER1-208ENST00000493207 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
RER1-208ENST00000493207 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
RER1-208ENST00000493207 INE1O15225 51 aa3.15□□□□□ -1.91
RER1-208ENST00000493207 PRM1P04553 51 aa3.14□□□□□ -1.91
RER1-208ENST00000493207 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
RER1-208ENST00000493207 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
RER1-208ENST00000493207 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
RER1-208ENST00000493207 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
RER1-208ENST00000493207 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms