RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
SGMS1-204ENST00000492601 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
SGMS1-204ENST00000492601 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
SGMS1-204ENST00000492601 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
SGMS1-204ENST00000492601 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
SGMS1-204ENST00000492601 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
SGMS1-204ENST00000492601 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
SGMS1-204ENST00000492601 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
SGMS1-204ENST00000492601 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
SGMS1-204ENST00000492601 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
SGMS1-204ENST00000492601 UQCR11O14957 56 aa5.72□□□□□ -1.49
SGMS1-204ENST00000492601 TMEM258P61165 79 aa5.62□□□□□ -1.51
SGMS1-204ENST00000492601 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
SGMS1-204ENST00000492601 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
SGMS1-204ENST00000492601 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
SGMS1-204ENST00000492601 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
SGMS1-204ENST00000492601 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SGMS1-204ENST00000492601 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
SGMS1-204ENST00000492601 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SGMS1-204ENST00000492601 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
SGMS1-204ENST00000492601 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
SGMS1-204ENST00000492601 K7ERS5 55 aa5.51□□□□□ -1.53
SGMS1-204ENST00000492601 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
SGMS1-204ENST00000492601 PSPHP1O15172 72 aa5.43□□□□□ -1.54
SGMS1-204ENST00000492601 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
SGMS1-204ENST00000492601 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
SGMS1-204ENST00000492601 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
SGMS1-204ENST00000492601 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
SGMS1-204ENST00000492601 V9GYY9 64 aa5.35□□□□□ -1.55
SGMS1-204ENST00000492601 Q1T7F1 81 aa5.31□□□□□ -1.56
SGMS1-204ENST00000492601 A6NED7 52 aa5.22□□□□□ -1.57
SGMS1-204ENST00000492601 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
SGMS1-204ENST00000492601 MT1AP04731 61 aa5.2□□□□□ -1.58
SGMS1-204ENST00000492601 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
SGMS1-204ENST00000492601 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
SGMS1-204ENST00000492601 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
SGMS1-204ENST00000492601 ROMO1P60602 79 aa5.11□□□□□ -1.59
SGMS1-204ENST00000492601 RPS28P62857 69 aaKnown RBP5.1□□□□□ -1.59
SGMS1-204ENST00000492601 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
SGMS1-204ENST00000492601 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
SGMS1-204ENST00000492601 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
SGMS1-204ENST00000492601 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
SGMS1-204ENST00000492601 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
SGMS1-204ENST00000492601 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
SGMS1-204ENST00000492601 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
SGMS1-204ENST00000492601 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
SGMS1-204ENST00000492601 MT3P25713 68 aa4.76□□□□□ -1.65
SGMS1-204ENST00000492601 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
SGMS1-204ENST00000492601 PCP4P48539 62 aa4.69□□□□□ -1.66
SGMS1-204ENST00000492601 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
SGMS1-204ENST00000492601 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
SGMS1-204ENST00000492601 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
SGMS1-204ENST00000492601 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
SGMS1-204ENST00000492601 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
SGMS1-204ENST00000492601 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SGMS1-204ENST00000492601 H3BS24 57 aa4.16□□□□□ -1.74
SGMS1-204ENST00000492601 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
SGMS1-204ENST00000492601 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
SGMS1-204ENST00000492601 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
SGMS1-204ENST00000492601 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
SGMS1-204ENST00000492601 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
SGMS1-204ENST00000492601 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
SGMS1-204ENST00000492601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
SGMS1-204ENST00000492601 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
SGMS1-204ENST00000492601 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
SGMS1-204ENST00000492601 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
SGMS1-204ENST00000492601 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
SGMS1-204ENST00000492601 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
SGMS1-204ENST00000492601 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
SGMS1-204ENST00000492601 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SGMS1-204ENST00000492601 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
SGMS1-204ENST00000492601 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
SGMS1-204ENST00000492601 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
SGMS1-204ENST00000492601 PRM1P04553 51 aa2.62□□□□□ -1.99
SGMS1-204ENST00000492601 NDUFAF8A1L188 74 aa2.58□□□□□ -2
SGMS1-204ENST00000492601 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
SGMS1-204ENST00000492601 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
SGMS1-204ENST00000492601 INE1O15225 51 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 124.8 ms