RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 KRTAP4-9Q9BYQ8 210 aa9.55□□□□□ -0.88
SH3GL3-204ENST00000492099 Q1T7F1 81 aa9.52□□□□□ -0.89
SH3GL3-204ENST00000492099 V9GYY9 64 aa9.5□□□□□ -0.89
SH3GL3-204ENST00000492099 PSPHP1O15172 72 aa9.38□□□□□ -0.91
SH3GL3-204ENST00000492099 LCE4AQ5TA78 99 aa9.37□□□□□ -0.91
SH3GL3-204ENST00000492099 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
SH3GL3-204ENST00000492099 KRTAP4-3Q9BYR4 195 aa9.35□□□□□ -0.91
SH3GL3-204ENST00000492099 KRTAP12-3P60328 96 aa9.34□□□□□ -0.91
SH3GL3-204ENST00000492099 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
SH3GL3-204ENST00000492099 LCE1DQ5T752 114 aa9.34□□□□□ -0.91
SH3GL3-204ENST00000492099 GPR98Q8WXG9 6306 aa9.27□□□□□ -0.93
SH3GL3-204ENST00000492099 K7ERS5 55 aa9.23□□□□□ -0.93
SH3GL3-204ENST00000492099 MT4P47944 62 aa9.23□□□□□ -0.93
SH3GL3-204ENST00000492099 KRTAP25-1Q3LHN0 102 aa9.23□□□□□ -0.93
SH3GL3-204ENST00000492099 KRTAP5-4Q6L8H1 288 aa9.18□□□□□ -0.94
SH3GL3-204ENST00000492099 HMCN1Q96RW7 5635 aa9.16□□□□□ -0.94
SH3GL3-204ENST00000492099 KRTAP4-7Q9BYR0 210 aa9.14□□□□□ -0.95
SH3GL3-204ENST00000492099 A6NED7 52 aa9.07□□□□□ -0.96
SH3GL3-204ENST00000492099 KRTAP4-6Q9BYQ5 205 aa8.96□□□□□ -0.98
SH3GL3-204ENST00000492099 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
SH3GL3-204ENST00000492099 KRTAP19-4Q3LI73 84 aa8.89□□□□□ -0.99
SH3GL3-204ENST00000492099 KRTAP5-5Q701N2 237 aaPredicted RBP8.81□□□□□ -1
SH3GL3-204ENST00000492099 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
SH3GL3-204ENST00000492099 AHNAK2Q8IVF2 5795 aa8.79□□□□□ -1
SH3GL3-204ENST00000492099 KRTAP15-1Q3LI76 137 aa8.74□□□□□ -1.01
SH3GL3-204ENST00000492099 KRTAP5-10Q6L8G5 202 aa8.68□□□□□ -1.02
SH3GL3-204ENST00000492099 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
SH3GL3-204ENST00000492099 KRTAP20-2Q3LI61 65 aa8.66□□□□□ -1.02
SH3GL3-204ENST00000492099 SPRR5A0A1B0GTR4 108 aa8.64□□□□□ -1.03
SH3GL3-204ENST00000492099 KRTAP12-4P60329 112 aa8.63□□□□□ -1.03
SH3GL3-204ENST00000492099 LCE3CQ5T5A8 94 aa8.6□□□□□ -1.03
SH3GL3-204ENST00000492099 ROMO1P60602 79 aa8.57□□□□□ -1.04
SH3GL3-204ENST00000492099 KRTAP5-3Q6L8H2 238 aa8.5□□□□□ -1.05
SH3GL3-204ENST00000492099 SYNE1Q8NF91 8797 aaKnown RBP8.45□□□□□ -1.06
SH3GL3-204ENST00000492099 KRTAP5-7Q6L8G8 165 aa8.36□□□□□ -1.07
SH3GL3-204ENST00000492099 MT1AP04731 61 aa8.21□□□□□ -1.1
SH3GL3-204ENST00000492099 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
SH3GL3-204ENST00000492099 KRTAP6-1Q3LI64 71 aa8.15□□□□□ -1.1
SH3GL3-204ENST00000492099 KRTAP9-6A8MVA2 160 aa8.07□□□□□ -1.12
SH3GL3-204ENST00000492099 KRTAP5-2Q701N4 177 aa8.03□□□□□ -1.12
SH3GL3-204ENST00000492099 KRTAP9-4Q9BYQ2 154 aa7.95□□□□□ -1.14
SH3GL3-204ENST00000492099 KRTAP4-11Q9BYQ6 195 aa7.92□□□□□ -1.14
SH3GL3-204ENST00000492099 KRTAP6-2Q3LI66 62 aa7.79□□□□□ -1.16
SH3GL3-204ENST00000492099 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
SH3GL3-204ENST00000492099 KRTAP5-8O75690 187 aa7.63□□□□□ -1.19
SH3GL3-204ENST00000492099 OBSCNQ5VST9 7968 aa7.57□□□□□ -1.2
SH3GL3-204ENST00000492099 MT3P25713 68 aa7.54□□□□□ -1.2
SH3GL3-204ENST00000492099 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
SH3GL3-204ENST00000492099 PRAC1Q96KF2 57 aa7.4□□□□□ -1.22
SH3GL3-204ENST00000492099 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
SH3GL3-204ENST00000492099 MUC5BQ9HC84 5762 aaPredicted RBP7.25□□□□□ -1.25
SH3GL3-204ENST00000492099 MUC5ACP98088 5654 aa7.23□□□□□ -1.25
SH3GL3-204ENST00000492099 AHNAKQ09666 5890 aaKnown RBP7.21□□□□□ -1.25
SH3GL3-204ENST00000492099 KRTAP5-1Q6L8H4 278 aa7.21□□□□□ -1.26
SH3GL3-204ENST00000492099 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
SH3GL3-204ENST00000492099 KRTAP4-12Q9BQ66 201 aa7.02□□□□□ -1.29
SH3GL3-204ENST00000492099 LCE1EQ5T753 118 aa6.94□□□□□ -1.3
SH3GL3-204ENST00000492099 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
SH3GL3-204ENST00000492099 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
SH3GL3-204ENST00000492099 LCE1BQ5T7P3 118 aa6.5□□□□□ -1.37
SH3GL3-204ENST00000492099 LCE1CQ5T751 118 aa6.43□□□□□ -1.38
SH3GL3-204ENST00000492099 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
SH3GL3-204ENST00000492099 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
SH3GL3-204ENST00000492099 H3BS24 57 aa5.95□□□□□ -1.46
SH3GL3-204ENST00000492099 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
SH3GL3-204ENST00000492099 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.84□□□□□ -1.47
SH3GL3-204ENST00000492099 KRTAP5-11Q6L8G4 156 aa5.81□□□□□ -1.48
SH3GL3-204ENST00000492099 LCE1FQ5T754 118 aa5.69□□□□□ -1.5
SH3GL3-204ENST00000492099 KRTAP21-2Q3LI59 83 aa5.37□□□□□ -1.55
SH3GL3-204ENST00000492099 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
SH3GL3-204ENST00000492099 PHGR1C9JFL3 82 aa5.06□□□□□ -1.6
SH3GL3-204ENST00000492099 KRTAP4-4Q9BYR3 166 aa4.9□□□□□ -1.63
SH3GL3-204ENST00000492099 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
SH3GL3-204ENST00000492099 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
SH3GL3-204ENST00000492099 PRM1P04553 51 aa4.42□□□□□ -1.7
SH3GL3-204ENST00000492099 INE1O15225 51 aa4.35□□□□□ -1.71
SH3GL3-204ENST00000492099 KRTAP21-1Q3LI58 79 aa3.87□□□□□ -1.79
SH3GL3-204ENST00000492099 MUC16Q8WXI7 14507 aa3.32□□□□□ -1.88
Retrieved 78 of 20,778 RNA–protein pairs in 112.4 ms