RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 PMAIP1Q13794 54 aa5.29□□□□□ -1.56
CDK9-204ENST00000491521 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
CDK9-204ENST00000491521 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
CDK9-204ENST00000491521 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
CDK9-204ENST00000491521 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
CDK9-204ENST00000491521 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
CDK9-204ENST00000491521 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
CDK9-204ENST00000491521 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CDK9-204ENST00000491521 MT1EP04732 61 aa5.03□□□□□ -1.6
CDK9-204ENST00000491521 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
CDK9-204ENST00000491521 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
CDK9-204ENST00000491521 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
CDK9-204ENST00000491521 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
CDK9-204ENST00000491521 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
CDK9-204ENST00000491521 PRAC1Q96KF2 57 aa4.96□□□□□ -1.62
CDK9-204ENST00000491521 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
CDK9-204ENST00000491521 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
CDK9-204ENST00000491521 MT1GP13640 62 aa4.85□□□□□ -1.63
CDK9-204ENST00000491521 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
CDK9-204ENST00000491521 MT1LQ93083 61 aa4.81□□□□□ -1.64
CDK9-204ENST00000491521 MT1MQ8N339 61 aa4.8□□□□□ -1.64
CDK9-204ENST00000491521 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CDK9-204ENST00000491521 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
CDK9-204ENST00000491521 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
CDK9-204ENST00000491521 MT4P47944 62 aa4.73□□□□□ -1.65
CDK9-204ENST00000491521 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
CDK9-204ENST00000491521 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CDK9-204ENST00000491521 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
CDK9-204ENST00000491521 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
CDK9-204ENST00000491521 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
CDK9-204ENST00000491521 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
CDK9-204ENST00000491521 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
CDK9-204ENST00000491521 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
CDK9-204ENST00000491521 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
CDK9-204ENST00000491521 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
CDK9-204ENST00000491521 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
CDK9-204ENST00000491521 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
CDK9-204ENST00000491521 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
CDK9-204ENST00000491521 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CDK9-204ENST00000491521 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
CDK9-204ENST00000491521 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
CDK9-204ENST00000491521 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CDK9-204ENST00000491521 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
CDK9-204ENST00000491521 MT1AP04731 61 aa4.09□□□□□ -1.75
CDK9-204ENST00000491521 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
CDK9-204ENST00000491521 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
CDK9-204ENST00000491521 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
CDK9-204ENST00000491521 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
CDK9-204ENST00000491521 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
CDK9-204ENST00000491521 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
CDK9-204ENST00000491521 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CDK9-204ENST00000491521 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
CDK9-204ENST00000491521 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
CDK9-204ENST00000491521 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
CDK9-204ENST00000491521 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CDK9-204ENST00000491521 MT3P25713 68 aa3.75□□□□□ -1.81
CDK9-204ENST00000491521 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
CDK9-204ENST00000491521 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
CDK9-204ENST00000491521 H3BS24 57 aa3.56□□□□□ -1.84
CDK9-204ENST00000491521 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
CDK9-204ENST00000491521 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CDK9-204ENST00000491521 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
CDK9-204ENST00000491521 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
CDK9-204ENST00000491521 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
CDK9-204ENST00000491521 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
CDK9-204ENST00000491521 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CDK9-204ENST00000491521 INE1O15225 51 aa3.15□□□□□ -1.91
CDK9-204ENST00000491521 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
CDK9-204ENST00000491521 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
CDK9-204ENST00000491521 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
CDK9-204ENST00000491521 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CDK9-204ENST00000491521 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CDK9-204ENST00000491521 PRM1P04553 51 aa2.77□□□□□ -1.97
CDK9-204ENST00000491521 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CDK9-204ENST00000491521 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CDK9-204ENST00000491521 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CDK9-204ENST00000491521 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
CDK9-204ENST00000491521 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms