RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
APP-216ENST00000491395 KRTAP13-4Q3LI77 160 aa3.18□□□□□ -1.9
APP-216ENST00000491395 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
APP-216ENST00000491395 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
APP-216ENST00000491395 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
APP-216ENST00000491395 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
APP-216ENST00000491395 A8MU10 97 aa3.1□□□□□ -1.91
APP-216ENST00000491395 UQCR11O14957 56 aa3.1□□□□□ -1.91
APP-216ENST00000491395 MT1EP04732 61 aa3.1□□□□□ -1.91
APP-216ENST00000491395 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
APP-216ENST00000491395 A0A0D9SG42 100 aa3.08□□□□□ -1.92
APP-216ENST00000491395 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
APP-216ENST00000491395 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
APP-216ENST00000491395 COA5Q86WW8 74 aa3.06□□□□□ -1.92
APP-216ENST00000491395 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
APP-216ENST00000491395 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
APP-216ENST00000491395 KRTAP12-1P59990 96 aa3□□□□□ -1.93
APP-216ENST00000491395 MT1GP13640 62 aa2.99□□□□□ -1.93
APP-216ENST00000491395 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
APP-216ENST00000491395 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
APP-216ENST00000491395 MT1MQ8N339 61 aa2.96□□□□□ -1.94
APP-216ENST00000491395 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
APP-216ENST00000491395 MT1LQ93083 61 aa2.95□□□□□ -1.94
APP-216ENST00000491395 INE1O15225 51 aa2.93□□□□□ -1.94
APP-216ENST00000491395 MT4P47944 62 aa2.93□□□□□ -1.94
APP-216ENST00000491395 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
APP-216ENST00000491395 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
APP-216ENST00000491395 A0A1B0GU69 56 aa2.91□□□□□ -1.94
APP-216ENST00000491395 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
APP-216ENST00000491395 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
APP-216ENST00000491395 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
APP-216ENST00000491395 TNP1P09430 55 aa2.87□□□□□ -1.95
APP-216ENST00000491395 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
APP-216ENST00000491395 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
APP-216ENST00000491395 MT3P25713 68 aa2.82□□□□□ -1.96
APP-216ENST00000491395 KRTAP4-7Q9BYR0 210 aa2.82□□□□□ -1.96
APP-216ENST00000491395 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
APP-216ENST00000491395 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
APP-216ENST00000491395 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
APP-216ENST00000491395 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
APP-216ENST00000491395 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
APP-216ENST00000491395 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
APP-216ENST00000491395 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
APP-216ENST00000491395 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
APP-216ENST00000491395 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
APP-216ENST00000491395 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
APP-216ENST00000491395 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
APP-216ENST00000491395 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
APP-216ENST00000491395 MT1AP04731 61 aa2.5□□□□□ -2.01
APP-216ENST00000491395 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
APP-216ENST00000491395 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
APP-216ENST00000491395 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
APP-216ENST00000491395 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
APP-216ENST00000491395 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
APP-216ENST00000491395 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
APP-216ENST00000491395 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
APP-216ENST00000491395 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
APP-216ENST00000491395 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
APP-216ENST00000491395 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
APP-216ENST00000491395 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
APP-216ENST00000491395 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
APP-216ENST00000491395 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
APP-216ENST00000491395 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
APP-216ENST00000491395 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
APP-216ENST00000491395 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
APP-216ENST00000491395 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
APP-216ENST00000491395 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
APP-216ENST00000491395 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
APP-216ENST00000491395 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
APP-216ENST00000491395 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
APP-216ENST00000491395 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
APP-216ENST00000491395 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
APP-216ENST00000491395 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
APP-216ENST00000491395 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
APP-216ENST00000491395 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
APP-216ENST00000491395 PRM1P04553 51 aa1.35□□□□□ -2.19
APP-216ENST00000491395 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
APP-216ENST00000491395 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms