RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
SNAPC3-206ENST00000490969 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
SNAPC3-206ENST00000490969 MT1LQ93083 61 aa6.51□□□□□ -1.37
SNAPC3-206ENST00000490969 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
SNAPC3-206ENST00000490969 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
SNAPC3-206ENST00000490969 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
SNAPC3-206ENST00000490969 MT1EP04732 61 aa6.43□□□□□ -1.38
SNAPC3-206ENST00000490969 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
SNAPC3-206ENST00000490969 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
SNAPC3-206ENST00000490969 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
SNAPC3-206ENST00000490969 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
SNAPC3-206ENST00000490969 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
SNAPC3-206ENST00000490969 MT1GP13640 62 aa6.13□□□□□ -1.43
SNAPC3-206ENST00000490969 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
SNAPC3-206ENST00000490969 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
SNAPC3-206ENST00000490969 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
SNAPC3-206ENST00000490969 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
SNAPC3-206ENST00000490969 MT1MQ8N339 61 aa6.05□□□□□ -1.44
SNAPC3-206ENST00000490969 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
SNAPC3-206ENST00000490969 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
SNAPC3-206ENST00000490969 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
SNAPC3-206ENST00000490969 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
SNAPC3-206ENST00000490969 SPRR2EP22531 72 aa5.84□□□□□ -1.47
SNAPC3-206ENST00000490969 SPRR2BP35325 72 aa5.84□□□□□ -1.47
SNAPC3-206ENST00000490969 SPRR2AP35326 72 aa5.84□□□□□ -1.47
SNAPC3-206ENST00000490969 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
SNAPC3-206ENST00000490969 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
SNAPC3-206ENST00000490969 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
SNAPC3-206ENST00000490969 MT1AP04731 61 aa5.68□□□□□ -1.5
SNAPC3-206ENST00000490969 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
SNAPC3-206ENST00000490969 SPRR2DP22532 72 aa5.59□□□□□ -1.51
SNAPC3-206ENST00000490969 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
SNAPC3-206ENST00000490969 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
SNAPC3-206ENST00000490969 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
SNAPC3-206ENST00000490969 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SNAPC3-206ENST00000490969 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
SNAPC3-206ENST00000490969 PRM1P04553 51 aa5.51□□□□□ -1.53
SNAPC3-206ENST00000490969 NEBP20929 6669 aa5.5□□□□□ -1.53
SNAPC3-206ENST00000490969 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
SNAPC3-206ENST00000490969 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
SNAPC3-206ENST00000490969 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
SNAPC3-206ENST00000490969 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SNAPC3-206ENST00000490969 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
SNAPC3-206ENST00000490969 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
SNAPC3-206ENST00000490969 MT4P47944 62 aa4.97□□□□□ -1.61
SNAPC3-206ENST00000490969 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
SNAPC3-206ENST00000490969 MT3P25713 68 aa4.85□□□□□ -1.63
SNAPC3-206ENST00000490969 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.63
SNAPC3-206ENST00000490969 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
SNAPC3-206ENST00000490969 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
SNAPC3-206ENST00000490969 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
SNAPC3-206ENST00000490969 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
SNAPC3-206ENST00000490969 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
SNAPC3-206ENST00000490969 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
SNAPC3-206ENST00000490969 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
SNAPC3-206ENST00000490969 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
SNAPC3-206ENST00000490969 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.75
SNAPC3-206ENST00000490969 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
SNAPC3-206ENST00000490969 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
SNAPC3-206ENST00000490969 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
SNAPC3-206ENST00000490969 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
SNAPC3-206ENST00000490969 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
SNAPC3-206ENST00000490969 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
SNAPC3-206ENST00000490969 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
SNAPC3-206ENST00000490969 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
SNAPC3-206ENST00000490969 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
SNAPC3-206ENST00000490969 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SNAPC3-206ENST00000490969 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
SNAPC3-206ENST00000490969 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SNAPC3-206ENST00000490969 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
SNAPC3-206ENST00000490969 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
SNAPC3-206ENST00000490969 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SNAPC3-206ENST00000490969 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
SNAPC3-206ENST00000490969 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SNAPC3-206ENST00000490969 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
SNAPC3-206ENST00000490969 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
SNAPC3-206ENST00000490969 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
SNAPC3-206ENST00000490969 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 179.9 ms