RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
LMNB2-203ENST00000490554 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
LMNB2-203ENST00000490554 TNP1P09430 55 aa5.13□□□□□ -1.59
LMNB2-203ENST00000490554 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
LMNB2-203ENST00000490554 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
LMNB2-203ENST00000490554 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
LMNB2-203ENST00000490554 SMIM26A0A096LP01 95 aa5.04□□□□□ -1.6
LMNB2-203ENST00000490554 A8MU10 97 aa5.02□□□□□ -1.61
LMNB2-203ENST00000490554 SERP2Q8N6R1 65 aa5.02□□□□□ -1.61
LMNB2-203ENST00000490554 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
LMNB2-203ENST00000490554 PCP4P48539 62 aa4.93□□□□□ -1.62
LMNB2-203ENST00000490554 A0A1B0GU69 56 aa4.91□□□□□ -1.62
LMNB2-203ENST00000490554 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
LMNB2-203ENST00000490554 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
LMNB2-203ENST00000490554 H7BZZ5 65 aa4.79□□□□□ -1.64
LMNB2-203ENST00000490554 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
LMNB2-203ENST00000490554 ANAPC13Q9BS18 74 aa4.78□□□□□ -1.64
LMNB2-203ENST00000490554 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
LMNB2-203ENST00000490554 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
LMNB2-203ENST00000490554 COX7CP15954 63 aa4.74□□□□□ -1.65
LMNB2-203ENST00000490554 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
LMNB2-203ENST00000490554 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
LMNB2-203ENST00000490554 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
LMNB2-203ENST00000490554 MT1AP04731 61 aa4.65□□□□□ -1.67
LMNB2-203ENST00000490554 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
LMNB2-203ENST00000490554 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
LMNB2-203ENST00000490554 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
LMNB2-203ENST00000490554 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
LMNB2-203ENST00000490554 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
LMNB2-203ENST00000490554 TMEM258P61165 79 aa4.54□□□□□ -1.68
LMNB2-203ENST00000490554 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
LMNB2-203ENST00000490554 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
LMNB2-203ENST00000490554 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
LMNB2-203ENST00000490554 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
LMNB2-203ENST00000490554 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
LMNB2-203ENST00000490554 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
LMNB2-203ENST00000490554 UQCR11O14957 56 aa4.48□□□□□ -1.69
LMNB2-203ENST00000490554 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
LMNB2-203ENST00000490554 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
LMNB2-203ENST00000490554 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
LMNB2-203ENST00000490554 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
LMNB2-203ENST00000490554 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
LMNB2-203ENST00000490554 K7ERS5 55 aa4.32□□□□□ -1.72
LMNB2-203ENST00000490554 V9GYY9 64 aa4.31□□□□□ -1.72
LMNB2-203ENST00000490554 MT3P25713 68 aa4.27□□□□□ -1.73
LMNB2-203ENST00000490554 Q1T7F1 81 aa4.14□□□□□ -1.75
LMNB2-203ENST00000490554 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
LMNB2-203ENST00000490554 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
LMNB2-203ENST00000490554 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
LMNB2-203ENST00000490554 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
LMNB2-203ENST00000490554 PSPHP1O15172 72 aa4.03□□□□□ -1.76
LMNB2-203ENST00000490554 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
LMNB2-203ENST00000490554 A6NED7 52 aa3.99□□□□□ -1.77
LMNB2-203ENST00000490554 ROMO1P60602 79 aa3.97□□□□□ -1.77
LMNB2-203ENST00000490554 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
LMNB2-203ENST00000490554 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
LMNB2-203ENST00000490554 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
LMNB2-203ENST00000490554 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
LMNB2-203ENST00000490554 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
LMNB2-203ENST00000490554 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
LMNB2-203ENST00000490554 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
LMNB2-203ENST00000490554 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
LMNB2-203ENST00000490554 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
LMNB2-203ENST00000490554 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
LMNB2-203ENST00000490554 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
LMNB2-203ENST00000490554 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
LMNB2-203ENST00000490554 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
LMNB2-203ENST00000490554 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
LMNB2-203ENST00000490554 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
LMNB2-203ENST00000490554 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
LMNB2-203ENST00000490554 H3BS24 57 aa2.88□□□□□ -1.95
LMNB2-203ENST00000490554 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
LMNB2-203ENST00000490554 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
LMNB2-203ENST00000490554 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
LMNB2-203ENST00000490554 INE1O15225 51 aa2.58□□□□□ -2
LMNB2-203ENST00000490554 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LMNB2-203ENST00000490554 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
LMNB2-203ENST00000490554 PRM1P04553 51 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 111.8 ms