RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
SEC13-218ENST00000490283 MT1GP13640 62 aa6.31□□□□□ -1.4
SEC13-218ENST00000490283 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
SEC13-218ENST00000490283 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
SEC13-218ENST00000490283 UQCR11O14957 56 aa6.26□□□□□ -1.41
SEC13-218ENST00000490283 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
SEC13-218ENST00000490283 MT1LQ93083 61 aa6.2□□□□□ -1.42
SEC13-218ENST00000490283 MT1MQ8N339 61 aa6.18□□□□□ -1.42
SEC13-218ENST00000490283 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
SEC13-218ENST00000490283 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
SEC13-218ENST00000490283 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
SEC13-218ENST00000490283 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
SEC13-218ENST00000490283 K7ERS5 55 aa6.07□□□□□ -1.44
SEC13-218ENST00000490283 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
SEC13-218ENST00000490283 V9GYY9 64 aa6.04□□□□□ -1.44
SEC13-218ENST00000490283 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
SEC13-218ENST00000490283 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
SEC13-218ENST00000490283 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
SEC13-218ENST00000490283 PSPHP1O15172 72 aa5.96□□□□□ -1.46
SEC13-218ENST00000490283 MT4P47944 62 aa5.96□□□□□ -1.46
SEC13-218ENST00000490283 Q1T7F1 81 aa5.93□□□□□ -1.46
SEC13-218ENST00000490283 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
SEC13-218ENST00000490283 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SEC13-218ENST00000490283 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
SEC13-218ENST00000490283 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
SEC13-218ENST00000490283 A6NED7 52 aa5.81□□□□□ -1.48
SEC13-218ENST00000490283 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
SEC13-218ENST00000490283 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
SEC13-218ENST00000490283 PCP4P48539 62 aa5.67□□□□□ -1.5
SEC13-218ENST00000490283 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
SEC13-218ENST00000490283 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
SEC13-218ENST00000490283 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
SEC13-218ENST00000490283 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
SEC13-218ENST00000490283 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
SEC13-218ENST00000490283 ROMO1P60602 79 aa5.58□□□□□ -1.52
SEC13-218ENST00000490283 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
SEC13-218ENST00000490283 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SEC13-218ENST00000490283 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
SEC13-218ENST00000490283 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
SEC13-218ENST00000490283 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
SEC13-218ENST00000490283 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
SEC13-218ENST00000490283 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
SEC13-218ENST00000490283 MT1AP04731 61 aa5.3□□□□□ -1.56
SEC13-218ENST00000490283 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
SEC13-218ENST00000490283 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
SEC13-218ENST00000490283 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
SEC13-218ENST00000490283 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
SEC13-218ENST00000490283 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
SEC13-218ENST00000490283 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
SEC13-218ENST00000490283 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SEC13-218ENST00000490283 MT3P25713 68 aa4.88□□□□□ -1.63
SEC13-218ENST00000490283 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
SEC13-218ENST00000490283 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
SEC13-218ENST00000490283 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
SEC13-218ENST00000490283 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
SEC13-218ENST00000490283 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
SEC13-218ENST00000490283 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
SEC13-218ENST00000490283 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
SEC13-218ENST00000490283 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SEC13-218ENST00000490283 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SEC13-218ENST00000490283 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
SEC13-218ENST00000490283 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
SEC13-218ENST00000490283 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SEC13-218ENST00000490283 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SEC13-218ENST00000490283 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
SEC13-218ENST00000490283 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
SEC13-218ENST00000490283 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SEC13-218ENST00000490283 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
SEC13-218ENST00000490283 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
SEC13-218ENST00000490283 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SEC13-218ENST00000490283 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
SEC13-218ENST00000490283 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SEC13-218ENST00000490283 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SEC13-218ENST00000490283 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
SEC13-218ENST00000490283 INE1O15225 51 aa2.84□□□□□ -1.95
SEC13-218ENST00000490283 PRM1P04553 51 aa2.83□□□□□ -1.96
SEC13-218ENST00000490283 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SEC13-218ENST00000490283 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 102.2 ms