RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
SSR1-210ENST00000489567 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
SSR1-210ENST00000489567 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
SSR1-210ENST00000489567 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
SSR1-210ENST00000489567 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SSR1-210ENST00000489567 A0A0D9SG42 100 aa3.19□□□□□ -1.9
SSR1-210ENST00000489567 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
SSR1-210ENST00000489567 KMT2DO14686 5537 aa3.17□□□□□ -1.9
SSR1-210ENST00000489567 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
SSR1-210ENST00000489567 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
SSR1-210ENST00000489567 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
SSR1-210ENST00000489567 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
SSR1-210ENST00000489567 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
SSR1-210ENST00000489567 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.92
SSR1-210ENST00000489567 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
SSR1-210ENST00000489567 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
SSR1-210ENST00000489567 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
SSR1-210ENST00000489567 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
SSR1-210ENST00000489567 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.93
SSR1-210ENST00000489567 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
SSR1-210ENST00000489567 NEBP20929 6669 aa3.02□□□□□ -1.93
SSR1-210ENST00000489567 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
SSR1-210ENST00000489567 SPRR2EP22531 72 aa3.01□□□□□ -1.93
SSR1-210ENST00000489567 SPRR2BP35325 72 aa3.01□□□□□ -1.93
SSR1-210ENST00000489567 SPRR2AP35326 72 aa3.01□□□□□ -1.93
SSR1-210ENST00000489567 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SSR1-210ENST00000489567 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
SSR1-210ENST00000489567 MT3P25713 68 aa2.94□□□□□ -1.94
SSR1-210ENST00000489567 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
SSR1-210ENST00000489567 MT1EP04732 61 aa2.92□□□□□ -1.94
SSR1-210ENST00000489567 TNP1P09430 55 aa2.92□□□□□ -1.94
SSR1-210ENST00000489567 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
SSR1-210ENST00000489567 SPRR2DP22532 72 aa2.9□□□□□ -1.94
SSR1-210ENST00000489567 LCE3AQ5TA76 89 aa2.9□□□□□ -1.94
SSR1-210ENST00000489567 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
SSR1-210ENST00000489567 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
SSR1-210ENST00000489567 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
SSR1-210ENST00000489567 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
SSR1-210ENST00000489567 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
SSR1-210ENST00000489567 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
SSR1-210ENST00000489567 MT1LQ93083 61 aa2.81□□□□□ -1.96
SSR1-210ENST00000489567 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
SSR1-210ENST00000489567 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
SSR1-210ENST00000489567 MT1GP13640 62 aa2.79□□□□□ -1.96
SSR1-210ENST00000489567 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SSR1-210ENST00000489567 MT1MQ8N339 61 aa2.77□□□□□ -1.97
SSR1-210ENST00000489567 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
SSR1-210ENST00000489567 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
SSR1-210ENST00000489567 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SSR1-210ENST00000489567 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
SSR1-210ENST00000489567 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
SSR1-210ENST00000489567 MT4P47944 62 aa2.54□□□□□ -2
SSR1-210ENST00000489567 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
SSR1-210ENST00000489567 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SSR1-210ENST00000489567 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
SSR1-210ENST00000489567 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
SSR1-210ENST00000489567 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.02
SSR1-210ENST00000489567 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
SSR1-210ENST00000489567 MT1AP04731 61 aa2.38□□□□□ -2.03
SSR1-210ENST00000489567 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
SSR1-210ENST00000489567 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
SSR1-210ENST00000489567 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SSR1-210ENST00000489567 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
SSR1-210ENST00000489567 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
SSR1-210ENST00000489567 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
SSR1-210ENST00000489567 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
SSR1-210ENST00000489567 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
SSR1-210ENST00000489567 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
SSR1-210ENST00000489567 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
SSR1-210ENST00000489567 PRM1P04553 51 aa1.88□□□□□ -2.11
SSR1-210ENST00000489567 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SSR1-210ENST00000489567 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
SSR1-210ENST00000489567 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SSR1-210ENST00000489567 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SSR1-210ENST00000489567 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
SSR1-210ENST00000489567 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SSR1-210ENST00000489567 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms