RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
TNRC6B-208ENST00000489500 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
TNRC6B-208ENST00000489500 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
TNRC6B-208ENST00000489500 SEC61GP60059 68 aa3.49□□□□□ -1.85
TNRC6B-208ENST00000489500 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
TNRC6B-208ENST00000489500 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
TNRC6B-208ENST00000489500 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
TNRC6B-208ENST00000489500 COA5Q86WW8 74 aa3.39□□□□□ -1.87
TNRC6B-208ENST00000489500 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
TNRC6B-208ENST00000489500 A0A0D9SG42 100 aa3.35□□□□□ -1.87
TNRC6B-208ENST00000489500 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
TNRC6B-208ENST00000489500 A0A1B0GU33 70 aa3.34□□□□□ -1.87
TNRC6B-208ENST00000489500 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
TNRC6B-208ENST00000489500 COX7CP15954 63 aa3.31□□□□□ -1.88
TNRC6B-208ENST00000489500 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
TNRC6B-208ENST00000489500 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
TNRC6B-208ENST00000489500 A0A1B0GU69 56 aa3.28□□□□□ -1.88
TNRC6B-208ENST00000489500 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
TNRC6B-208ENST00000489500 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
TNRC6B-208ENST00000489500 MT1EP04732 61 aa3.26□□□□□ -1.89
TNRC6B-208ENST00000489500 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
TNRC6B-208ENST00000489500 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
TNRC6B-208ENST00000489500 H7BZZ5 65 aa3.23□□□□□ -1.89
TNRC6B-208ENST00000489500 MT1GP13640 62 aa3.23□□□□□ -1.89
TNRC6B-208ENST00000489500 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
TNRC6B-208ENST00000489500 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
TNRC6B-208ENST00000489500 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
TNRC6B-208ENST00000489500 TNP1P09430 55 aa3.2□□□□□ -1.9
TNRC6B-208ENST00000489500 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
TNRC6B-208ENST00000489500 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
TNRC6B-208ENST00000489500 ANAPC13Q9BS18 74 aa3.18□□□□□ -1.9
TNRC6B-208ENST00000489500 ATP5EP56381 51 aaPredicted RBP3.15□□□□□ -1.91
TNRC6B-208ENST00000489500 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
TNRC6B-208ENST00000489500 MT1MQ8N339 61 aa3.11□□□□□ -1.91
TNRC6B-208ENST00000489500 MT1LQ93083 61 aa3.11□□□□□ -1.91
TNRC6B-208ENST00000489500 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
TNRC6B-208ENST00000489500 UQCR11O14957 56 aa3.07□□□□□ -1.92
TNRC6B-208ENST00000489500 MT4P47944 62 aa3.07□□□□□ -1.92
TNRC6B-208ENST00000489500 LINC01558Q9Y6Z2 57 aa3.07□□□□□ -1.92
TNRC6B-208ENST00000489500 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
TNRC6B-208ENST00000489500 K7ERS5 55 aa3.03□□□□□ -1.92
TNRC6B-208ENST00000489500 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
TNRC6B-208ENST00000489500 TMEM258P61165 79 aa3□□□□□ -1.93
TNRC6B-208ENST00000489500 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
TNRC6B-208ENST00000489500 MIR22HGQ0VDD5 57 aa2.97□□□□□ -1.93
TNRC6B-208ENST00000489500 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
TNRC6B-208ENST00000489500 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
TNRC6B-208ENST00000489500 V9GYY9 64 aa2.93□□□□□ -1.94
TNRC6B-208ENST00000489500 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
TNRC6B-208ENST00000489500 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
TNRC6B-208ENST00000489500 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
TNRC6B-208ENST00000489500 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
TNRC6B-208ENST00000489500 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
TNRC6B-208ENST00000489500 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
TNRC6B-208ENST00000489500 PSPHP1O15172 72 aa2.83□□□□□ -1.96
TNRC6B-208ENST00000489500 Q1T7F1 81 aa2.81□□□□□ -1.96
TNRC6B-208ENST00000489500 A6NED7 52 aa2.79□□□□□ -1.96
TNRC6B-208ENST00000489500 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
TNRC6B-208ENST00000489500 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
TNRC6B-208ENST00000489500 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
TNRC6B-208ENST00000489500 ROMO1P60602 79 aa2.71□□□□□ -1.98
TNRC6B-208ENST00000489500 MT1AP04731 61 aa2.66□□□□□ -1.98
TNRC6B-208ENST00000489500 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
TNRC6B-208ENST00000489500 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
TNRC6B-208ENST00000489500 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
TNRC6B-208ENST00000489500 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TNRC6B-208ENST00000489500 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
TNRC6B-208ENST00000489500 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
TNRC6B-208ENST00000489500 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
TNRC6B-208ENST00000489500 PMAIP1Q13794 54 aa2.17□□□□□ -2.06
TNRC6B-208ENST00000489500 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
TNRC6B-208ENST00000489500 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
TNRC6B-208ENST00000489500 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
TNRC6B-208ENST00000489500 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TNRC6B-208ENST00000489500 PRM1P04553 51 aa1.34□□□□□ -2.19
TNRC6B-208ENST00000489500 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TNRC6B-208ENST00000489500 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
TNRC6B-208ENST00000489500 INE1O15225 51 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms