RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
SH3YL1-225ENST00000488979 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
SH3YL1-225ENST00000488979 CCDC179H3BU77 68 aa3.53□□□□□ -1.84
SH3YL1-225ENST00000488979 MT1MQ8N339 61 aa3.52□□□□□ -1.85
SH3YL1-225ENST00000488979 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
SH3YL1-225ENST00000488979 MT1LQ93083 61 aa3.49□□□□□ -1.85
SH3YL1-225ENST00000488979 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
SH3YL1-225ENST00000488979 SNURFQ9Y675 71 aa3.48□□□□□ -1.85
SH3YL1-225ENST00000488979 SEC61GP60059 68 aa3.47□□□□□ -1.85
SH3YL1-225ENST00000488979 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
SH3YL1-225ENST00000488979 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
SH3YL1-225ENST00000488979 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
SH3YL1-225ENST00000488979 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
SH3YL1-225ENST00000488979 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
SH3YL1-225ENST00000488979 A0A1B0GU33 70 aa3.41□□□□□ -1.86
SH3YL1-225ENST00000488979 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
SH3YL1-225ENST00000488979 COA5Q86WW8 74 aa3.41□□□□□ -1.86
SH3YL1-225ENST00000488979 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
SH3YL1-225ENST00000488979 V9GYY9 64 aa3.38□□□□□ -1.87
SH3YL1-225ENST00000488979 TMEM258P61165 79 aa3.37□□□□□ -1.87
SH3YL1-225ENST00000488979 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
SH3YL1-225ENST00000488979 COX7CP15954 63 aa3.36□□□□□ -1.87
SH3YL1-225ENST00000488979 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
SH3YL1-225ENST00000488979 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
SH3YL1-225ENST00000488979 TNP1P09430 55 aa3.35□□□□□ -1.87
SH3YL1-225ENST00000488979 SMIM26A0A096LP01 95 aa3.34□□□□□ -1.87
SH3YL1-225ENST00000488979 MT3P25713 68 aa3.34□□□□□ -1.87
SH3YL1-225ENST00000488979 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
SH3YL1-225ENST00000488979 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
SH3YL1-225ENST00000488979 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SH3YL1-225ENST00000488979 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
SH3YL1-225ENST00000488979 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
SH3YL1-225ENST00000488979 A0A1B0GU69 56 aa3.25□□□□□ -1.89
SH3YL1-225ENST00000488979 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
SH3YL1-225ENST00000488979 A8MU10 97 aa3.24□□□□□ -1.89
SH3YL1-225ENST00000488979 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SH3YL1-225ENST00000488979 H7BZZ5 65 aa3.22□□□□□ -1.89
SH3YL1-225ENST00000488979 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
SH3YL1-225ENST00000488979 BRK1Q8WUW1 75 aa3.21□□□□□ -1.9
SH3YL1-225ENST00000488979 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
SH3YL1-225ENST00000488979 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
SH3YL1-225ENST00000488979 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
SH3YL1-225ENST00000488979 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
SH3YL1-225ENST00000488979 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
SH3YL1-225ENST00000488979 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
SH3YL1-225ENST00000488979 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
SH3YL1-225ENST00000488979 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
SH3YL1-225ENST00000488979 Q1T7F1 81 aa3.07□□□□□ -1.92
SH3YL1-225ENST00000488979 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
SH3YL1-225ENST00000488979 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SH3YL1-225ENST00000488979 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SH3YL1-225ENST00000488979 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
SH3YL1-225ENST00000488979 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
SH3YL1-225ENST00000488979 UQCR11O14957 56 aa3□□□□□ -1.93
SH3YL1-225ENST00000488979 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
SH3YL1-225ENST00000488979 PSPHP1O15172 72 aa2.97□□□□□ -1.93
SH3YL1-225ENST00000488979 MT1AP04731 61 aa2.97□□□□□ -1.93
SH3YL1-225ENST00000488979 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
SH3YL1-225ENST00000488979 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
SH3YL1-225ENST00000488979 K7ERS5 55 aa2.91□□□□□ -1.94
SH3YL1-225ENST00000488979 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
SH3YL1-225ENST00000488979 A6NED7 52 aa2.88□□□□□ -1.95
SH3YL1-225ENST00000488979 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
SH3YL1-225ENST00000488979 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SH3YL1-225ENST00000488979 ROMO1P60602 79 aa2.69□□□□□ -1.98
SH3YL1-225ENST00000488979 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
SH3YL1-225ENST00000488979 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
SH3YL1-225ENST00000488979 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
SH3YL1-225ENST00000488979 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SH3YL1-225ENST00000488979 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SH3YL1-225ENST00000488979 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SH3YL1-225ENST00000488979 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
SH3YL1-225ENST00000488979 INE1O15225 51 aa2.08□□□□□ -2.08
SH3YL1-225ENST00000488979 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SH3YL1-225ENST00000488979 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
SH3YL1-225ENST00000488979 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SH3YL1-225ENST00000488979 PRM1P04553 51 aa1.33□□□□□ -2.2
SH3YL1-225ENST00000488979 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms