RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 AHNAK2Q8IVF2 5795 aa8.97□□□□□ -0.97
RNF220-216ENST00000488865 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
RNF220-216ENST00000488865 KRTAP5-10Q6L8G5 202 aa8.89□□□□□ -0.99
RNF220-216ENST00000488865 ANAPC13Q9BS18 74 aa8.75□□□□□ -1.01
RNF220-216ENST00000488865 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
RNF220-216ENST00000488865 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.02
RNF220-216ENST00000488865 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
RNF220-216ENST00000488865 KRTAP5-7Q6L8G8 165 aa8.6□□□□□ -1.03
RNF220-216ENST00000488865 KRTAP5-3Q6L8H2 238 aa8.6□□□□□ -1.03
RNF220-216ENST00000488865 KRTAP20-2Q3LI61 65 aa8.56□□□□□ -1.04
RNF220-216ENST00000488865 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
RNF220-216ENST00000488865 KRTAP5-5Q701N2 237 aaPredicted RBP8.54□□□□□ -1.04
RNF220-216ENST00000488865 ATP5EP56381 51 aaPredicted RBP8.53□□□□□ -1.04
RNF220-216ENST00000488865 SPRR5A0A1B0GTR4 108 aa8.5□□□□□ -1.05
RNF220-216ENST00000488865 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
RNF220-216ENST00000488865 KRTAP12-4P60329 112 aa8.42□□□□□ -1.06
RNF220-216ENST00000488865 UQCR11O14957 56 aa8.33□□□□□ -1.08
RNF220-216ENST00000488865 KRTAP25-1Q3LHN0 102 aa8.31□□□□□ -1.08
RNF220-216ENST00000488865 SYNE1Q8NF91 8797 aaKnown RBP8.28□□□□□ -1.08
RNF220-216ENST00000488865 TMEM258P61165 79 aa8.28□□□□□ -1.08
RNF220-216ENST00000488865 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
RNF220-216ENST00000488865 KRTAP19-4Q3LI73 84 aa8.27□□□□□ -1.09
RNF220-216ENST00000488865 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
RNF220-216ENST00000488865 K7ERS5 55 aa8.04□□□□□ -1.12
RNF220-216ENST00000488865 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
RNF220-216ENST00000488865 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
RNF220-216ENST00000488865 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
RNF220-216ENST00000488865 KRTAP4-11Q9BYQ6 195 aa7.9□□□□□ -1.14
RNF220-216ENST00000488865 KRTAP5-2Q701N4 177 aa7.88□□□□□ -1.15
RNF220-216ENST00000488865 V9GYY9 64 aa7.88□□□□□ -1.15
RNF220-216ENST00000488865 MT1AP04731 61 aa7.84□□□□□ -1.15
RNF220-216ENST00000488865 KRTAP6-1Q3LI64 71 aa7.8□□□□□ -1.16
RNF220-216ENST00000488865 Q1T7F1 81 aa7.79□□□□□ -1.16
RNF220-216ENST00000488865 PSPHP1O15172 72 aa7.77□□□□□ -1.17
RNF220-216ENST00000488865 KRTAP5-8O75690 187 aa7.65□□□□□ -1.18
RNF220-216ENST00000488865 KRTAP9-4Q9BYQ2 154 aa7.63□□□□□ -1.19
RNF220-216ENST00000488865 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
RNF220-216ENST00000488865 A6NED7 52 aa7.53□□□□□ -1.2
RNF220-216ENST00000488865 KRTAP9-6A8MVA2 160 aa7.53□□□□□ -1.2
RNF220-216ENST00000488865 KRTAP6-2Q3LI66 62 aa7.53□□□□□ -1.2
RNF220-216ENST00000488865 RPS28P62857 69 aaKnown RBP7.48□□□□□ -1.21
RNF220-216ENST00000488865 MUC5ACP98088 5654 aa7.44□□□□□ -1.22
RNF220-216ENST00000488865 ROMO1P60602 79 aa7.41□□□□□ -1.22
RNF220-216ENST00000488865 AHNAKQ09666 5890 aaKnown RBP7.4□□□□□ -1.22
RNF220-216ENST00000488865 MUC5BQ9HC84 5762 aaPredicted RBP7.4□□□□□ -1.23
RNF220-216ENST00000488865 OBSCNQ5VST9 7968 aa7.38□□□□□ -1.23
RNF220-216ENST00000488865 KRTAP9-9Q9BYP9 154 aa7.32□□□□□ -1.24
RNF220-216ENST00000488865 PCP4P48539 62 aa7.23□□□□□ -1.25
RNF220-216ENST00000488865 MT3P25713 68 aa7.2□□□□□ -1.26
RNF220-216ENST00000488865 KRTAP5-1Q6L8H4 278 aa7.12□□□□□ -1.27
RNF220-216ENST00000488865 LCE1EQ5T753 118 aa6.72□□□□□ -1.33
RNF220-216ENST00000488865 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
RNF220-216ENST00000488865 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
RNF220-216ENST00000488865 LCE1BQ5T7P3 118 aa6.3□□□□□ -1.4
RNF220-216ENST00000488865 LCE1CQ5T751 118 aa6.23□□□□□ -1.41
RNF220-216ENST00000488865 PMAIP1Q13794 54 aa6.07□□□□□ -1.44
RNF220-216ENST00000488865 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
RNF220-216ENST00000488865 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
RNF220-216ENST00000488865 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
RNF220-216ENST00000488865 KRTAP5-11Q6L8G4 156 aa5.67□□□□□ -1.5
RNF220-216ENST00000488865 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.64□□□□□ -1.51
RNF220-216ENST00000488865 LCE1FQ5T754 118 aa5.62□□□□□ -1.51
RNF220-216ENST00000488865 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
RNF220-216ENST00000488865 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
RNF220-216ENST00000488865 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
RNF220-216ENST00000488865 PHGR1C9JFL3 82 aa5.18□□□□□ -1.58
RNF220-216ENST00000488865 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
RNF220-216ENST00000488865 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
RNF220-216ENST00000488865 LUZP6Q538Z0 58 aa5□□□□□ -1.61
RNF220-216ENST00000488865 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
RNF220-216ENST00000488865 MUC19Q7Z5P9 8384 aa4.58□□□□□ -1.68
RNF220-216ENST00000488865 KRTAP21-1Q3LI58 79 aa3.96□□□□□ -1.78
RNF220-216ENST00000488865 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
RNF220-216ENST00000488865 PRM1P04553 51 aa3.75□□□□□ -1.81
RNF220-216ENST00000488865 MUC16Q8WXI7 14507 aa3.3□□□□□ -1.88
RNF220-216ENST00000488865 INE1O15225 51 aa3.17□□□□□ -1.9
RNF220-216ENST00000488865 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
RNF220-216ENST00000488865 H3BS24 57 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 152.1 ms