RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
GGPS1-206ENST00000488594 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
GGPS1-206ENST00000488594 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
GGPS1-206ENST00000488594 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
GGPS1-206ENST00000488594 A0A1B0GU33 70 aa6.52□□□□□ -1.37
GGPS1-206ENST00000488594 COA5Q86WW8 74 aa6.5□□□□□ -1.37
GGPS1-206ENST00000488594 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
GGPS1-206ENST00000488594 TNP1P09430 55 aa6.42□□□□□ -1.38
GGPS1-206ENST00000488594 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
GGPS1-206ENST00000488594 SERP2Q8N6R1 65 aa6.37□□□□□ -1.39
GGPS1-206ENST00000488594 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
GGPS1-206ENST00000488594 SPRR5A0A1B0GTR4 108 aa6.36□□□□□ -1.39
GGPS1-206ENST00000488594 K7ERU9 68 aa6.31□□□□□ -1.4
GGPS1-206ENST00000488594 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
GGPS1-206ENST00000488594 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
GGPS1-206ENST00000488594 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
GGPS1-206ENST00000488594 A8MU10 97 aa6.25□□□□□ -1.41
GGPS1-206ENST00000488594 A0A1B0GU69 56 aa6.21□□□□□ -1.41
GGPS1-206ENST00000488594 PCP4P48539 62 aa6.17□□□□□ -1.42
GGPS1-206ENST00000488594 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
GGPS1-206ENST00000488594 H7BZZ5 65 aa6.05□□□□□ -1.44
GGPS1-206ENST00000488594 COX7CP15954 63 aa6.02□□□□□ -1.45
GGPS1-206ENST00000488594 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
GGPS1-206ENST00000488594 A0A0A0MQY5 61 aa5.9□□□□□ -1.47
GGPS1-206ENST00000488594 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
GGPS1-206ENST00000488594 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
GGPS1-206ENST00000488594 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
GGPS1-206ENST00000488594 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
GGPS1-206ENST00000488594 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
GGPS1-206ENST00000488594 MUC5ACP98088 5654 aa5.75□□□□□ -1.49
GGPS1-206ENST00000488594 MT1AP04731 61 aa5.73□□□□□ -1.49
GGPS1-206ENST00000488594 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
GGPS1-206ENST00000488594 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
GGPS1-206ENST00000488594 UQCR11O14957 56 aa5.69□□□□□ -1.5
GGPS1-206ENST00000488594 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
GGPS1-206ENST00000488594 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.5
GGPS1-206ENST00000488594 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
GGPS1-206ENST00000488594 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
GGPS1-206ENST00000488594 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
GGPS1-206ENST00000488594 ANAPC13Q9BS18 74 aa5.55□□□□□ -1.52
GGPS1-206ENST00000488594 K7ERS5 55 aa5.54□□□□□ -1.52
GGPS1-206ENST00000488594 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
GGPS1-206ENST00000488594 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
GGPS1-206ENST00000488594 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
GGPS1-206ENST00000488594 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
GGPS1-206ENST00000488594 MT3P25713 68 aa5.28□□□□□ -1.56
GGPS1-206ENST00000488594 TMEM258P61165 79 aa5.24□□□□□ -1.57
GGPS1-206ENST00000488594 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
GGPS1-206ENST00000488594 CDC42SE1Q9NRR8 79 aa5.16□□□□□ -1.58
GGPS1-206ENST00000488594 PSPHP1O15172 72 aa5.12□□□□□ -1.59
GGPS1-206ENST00000488594 Q1T7F1 81 aa5.12□□□□□ -1.59
GGPS1-206ENST00000488594 V9GYY9 64 aa5.1□□□□□ -1.59
GGPS1-206ENST00000488594 ROMO1P60602 79 aa5.03□□□□□ -1.6
GGPS1-206ENST00000488594 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
GGPS1-206ENST00000488594 A6NED7 52 aa4.93□□□□□ -1.62
GGPS1-206ENST00000488594 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
GGPS1-206ENST00000488594 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
GGPS1-206ENST00000488594 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
GGPS1-206ENST00000488594 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
GGPS1-206ENST00000488594 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
GGPS1-206ENST00000488594 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
GGPS1-206ENST00000488594 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
GGPS1-206ENST00000488594 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
GGPS1-206ENST00000488594 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
GGPS1-206ENST00000488594 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
GGPS1-206ENST00000488594 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
GGPS1-206ENST00000488594 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
GGPS1-206ENST00000488594 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
GGPS1-206ENST00000488594 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
GGPS1-206ENST00000488594 BRK1Q8WUW1 75 aa3.65□□□□□ -1.82
GGPS1-206ENST00000488594 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
GGPS1-206ENST00000488594 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
GGPS1-206ENST00000488594 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
GGPS1-206ENST00000488594 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
GGPS1-206ENST00000488594 PRM1P04553 51 aa2.52□□□□□ -2.01
GGPS1-206ENST00000488594 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
GGPS1-206ENST00000488594 INE1O15225 51 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 53.1 ms