RNA–Protein interactions for RNA: ENST00000488474.1

PRKAR1B-210, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, human

TSL 3

Gene PRKAR1B, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1B-210	ENST00000488474	PSPHP1	O15172	72 aa		5.07	□□□□□ -1.6
PRKAR1B-210	ENST00000488474	MT1L	Q93083	61 aa		5.07	□□□□□ -1.6
PRKAR1B-210	ENST00000488474	RPS28	P62857	69 aa	Known RBP	5.05	□□□□□ -1.6
PRKAR1B-210	ENST00000488474		Q1T7F1	81 aa		5.04	□□□□□ -1.6
PRKAR1B-210	ENST00000488474	MT1M	Q8N339	61 aa		5.04	□□□□□ -1.6
PRKAR1B-210	ENST00000488474	KRTAP25-1	Q3LHN0	102 aa		5.02	□□□□□ -1.61
PRKAR1B-210	ENST00000488474	KRTAP12-3	P60328	96 aa		4.99	□□□□□ -1.61
PRKAR1B-210	ENST00000488474		A6NED7	52 aa		4.96	□□□□□ -1.62
PRKAR1B-210	ENST00000488474	DST	Q03001	7570 aa	Known RBP	4.96	□□□□□ -1.62
PRKAR1B-210	ENST00000488474	KRTAP4-9	Q9BYQ8	210 aa		4.91	□□□□□ -1.62
PRKAR1B-210	ENST00000488474	LCE4A	Q5TA78	99 aa		4.9	□□□□□ -1.63
PRKAR1B-210	ENST00000488474	KRTAP4-3	Q9BYR4	195 aa		4.85	□□□□□ -1.63
PRKAR1B-210	ENST00000488474	CDC42SE1	Q9NRR8	79 aa		4.85	□□□□□ -1.63
PRKAR1B-210	ENST00000488474	LCE1D	Q5T752	114 aa		4.83	□□□□□ -1.64
PRKAR1B-210	ENST00000488474	KRTAP23-1	A1A580	65 aa		4.81	□□□□□ -1.64
PRKAR1B-210	ENST00000488474	MT4	P47944	62 aa		4.81	□□□□□ -1.64
PRKAR1B-210	ENST00000488474	KRTAP19-4	Q3LI73	84 aa		4.76	□□□□□ -1.65
PRKAR1B-210	ENST00000488474	KRTAP4-7	Q9BYR0	210 aa		4.76	□□□□□ -1.65
PRKAR1B-210	ENST00000488474	KRTAP5-4	Q6L8H1	288 aa		4.73	□□□□□ -1.65
PRKAR1B-210	ENST00000488474	ROMO1	P60602	79 aa		4.72	□□□□□ -1.65
PRKAR1B-210	ENST00000488474	KRTAP15-1	Q3LI76	137 aa		4.68	□□□□□ -1.66
PRKAR1B-210	ENST00000488474	HMCN1	Q96RW7	5635 aa		4.65	□□□□□ -1.66
PRKAR1B-210	ENST00000488474	GPR98	Q8WXG9	6306 aa		4.62	□□□□□ -1.67
PRKAR1B-210	ENST00000488474	KRTAP4-6	Q9BYQ5	205 aa		4.61	□□□□□ -1.67
PRKAR1B-210	ENST00000488474	LCE3C	Q5T5A8	94 aa		4.58	□□□□□ -1.68
PRKAR1B-210	ENST00000488474	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKAR1B-210	ENST00000488474	KRTAP12-4	P60329	112 aa		4.56	□□□□□ -1.68
PRKAR1B-210	ENST00000488474	LOC100996750	A0A140TA64	210 aa		4.51	□□□□□ -1.69
PRKAR1B-210	ENST00000488474	SPRR5	A0A1B0GTR4	108 aa		4.51	□□□□□ -1.69
PRKAR1B-210	ENST00000488474	KRTAP20-2	Q3LI61	65 aa		4.49	□□□□□ -1.69
PRKAR1B-210	ENST00000488474	AHNAK2	Q8IVF2	5795 aa		4.46	□□□□□ -1.7
PRKAR1B-210	ENST00000488474	PRO0628	Q9UI54	55 aa		4.45	□□□□□ -1.7
PRKAR1B-210	ENST00000488474	KRTAP5-10	Q6L8G5	202 aa		4.43	□□□□□ -1.7
PRKAR1B-210	ENST00000488474	BRK1	Q8WUW1	75 aa		4.38	□□□□□ -1.71
PRKAR1B-210	ENST00000488474	KRTAP5-3	Q6L8H2	238 aa		4.37	□□□□□ -1.71
PRKAR1B-210	ENST00000488474	SVIP	Q8NHG7	77 aa		4.36	□□□□□ -1.71
PRKAR1B-210	ENST00000488474	MT1A	P04731	61 aa		4.34	□□□□□ -1.71
PRKAR1B-210	ENST00000488474	KRTAP5-7	Q6L8G8	165 aa		4.27	□□□□□ -1.73
PRKAR1B-210	ENST00000488474	SYNE1	Q8NF91	8797 aa	Known RBP	4.26	□□□□□ -1.73
PRKAR1B-210	ENST00000488474	KRTAP6-1	Q3LI64	71 aa		4.26	□□□□□ -1.73
PRKAR1B-210	ENST00000488474	KRTAP9-6	A8MVA2	160 aa		4.22	□□□□□ -1.73
PRKAR1B-210	ENST00000488474		H3BS24	57 aa		4.2	□□□□□ -1.74
PRKAR1B-210	ENST00000488474	PMAIP1	Q13794	54 aa		4.19	□□□□□ -1.74
PRKAR1B-210	ENST00000488474	KRTAP5-2	Q701N4	177 aa		4.16	□□□□□ -1.74
PRKAR1B-210	ENST00000488474	KRTAP9-4	Q9BYQ2	154 aa		4.16	□□□□□ -1.74
PRKAR1B-210	ENST00000488474	KRTAP4-11	Q9BYQ6	195 aa		4.09	□□□□□ -1.75
PRKAR1B-210	ENST00000488474	KRTAP6-2	Q3LI66	62 aa		4.08	□□□□□ -1.76
PRKAR1B-210	ENST00000488474	KTN1-AS1	Q86SY8	53 aa		4.08	□□□□□ -1.76
PRKAR1B-210	ENST00000488474	MT3	P25713	68 aa		3.99	□□□□□ -1.77
PRKAR1B-210	ENST00000488474	KRTAP5-8	O75690	187 aa		3.91	□□□□□ -1.78
PRKAR1B-210	ENST00000488474	PRAC1	Q96KF2	57 aa		3.84	□□□□□ -1.79
PRKAR1B-210	ENST00000488474	KRTAP9-9	Q9BYP9	154 aa		3.8	□□□□□ -1.8
PRKAR1B-210	ENST00000488474	OBSCN	Q5VST9	7968 aa		3.76	□□□□□ -1.81
PRKAR1B-210	ENST00000488474	KRTAP5-1	Q6L8H4	278 aa		3.7	□□□□□ -1.82
PRKAR1B-210	ENST00000488474	MUC5AC	P98088	5654 aa		3.67	□□□□□ -1.82
PRKAR1B-210	ENST00000488474	LCE1E	Q5T753	118 aa		3.63	□□□□□ -1.83
PRKAR1B-210	ENST00000488474	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.63	□□□□□ -1.83
PRKAR1B-210	ENST00000488474	AHNAK	Q09666	5890 aa	Known RBP	3.62	□□□□□ -1.83
PRKAR1B-210	ENST00000488474	LCE1B	Q5T7P3	118 aa		3.43	□□□□□ -1.86
PRKAR1B-210	ENST00000488474	LUZP6	Q538Z0	58 aa		3.39	□□□□□ -1.87
PRKAR1B-210	ENST00000488474	KRTAP4-2	Q9BYR5	136 aa		3.36	□□□□□ -1.87
PRKAR1B-210	ENST00000488474	LCE1C	Q5T751	118 aa		3.35	□□□□□ -1.87
PRKAR1B-210	ENST00000488474	LCE3D	Q9BYE3	92 aa		3.34	□□□□□ -1.87
PRKAR1B-210	ENST00000488474		A0A0A0MQY5	61 aa		3.26	□□□□□ -1.89
PRKAR1B-210	ENST00000488474	LCE3E	Q5T5B0	92 aa		3.16	□□□□□ -1.9
PRKAR1B-210	ENST00000488474	NDUFAF8	A1L188	74 aa		3.12	□□□□□ -1.91
PRKAR1B-210	ENST00000488474	KRTAP4-12	Q9BQ66	201 aa		3.11	□□□□□ -1.91
PRKAR1B-210	ENST00000488474	KRTAP5-11	Q6L8G4	156 aa		3.05	□□□□□ -1.92
PRKAR1B-210	ENST00000488474	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.04	□□□□□ -1.92
PRKAR1B-210	ENST00000488474	LCE1F	Q5T754	118 aa		2.97	□□□□□ -1.93
PRKAR1B-210	ENST00000488474	KRTAP21-2	Q3LI59	83 aa		2.78	□□□□□ -1.96
PRKAR1B-210	ENST00000488474	INE1	O15225	51 aa		2.7	□□□□□ -1.98
PRKAR1B-210	ENST00000488474	PHGR1	C9JFL3	82 aa		2.63	□□□□□ -1.99
PRKAR1B-210	ENST00000488474	KRTAP4-4	Q9BYR3	166 aa		2.56	□□□□□ -2
PRKAR1B-210	ENST00000488474	PRM1	P04553	51 aa		2.4	□□□□□ -2.03
PRKAR1B-210	ENST00000488474	MUC19	Q7Z5P9	8384 aa		2.32	□□□□□ -2.04
PRKAR1B-210	ENST00000488474	KRTAP21-1	Q3LI58	79 aa		2.02	□□□□□ -2.09
PRKAR1B-210	ENST00000488474	MUC16	Q8WXI7	14507 aa		1.69	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 74.3 ms