RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
CD55-209ENST00000488171 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
CD55-209ENST00000488171 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
CD55-209ENST00000488171 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
CD55-209ENST00000488171 MT1GP13640 62 aa6.98□□□□□ -1.29
CD55-209ENST00000488171 A0A1B0GU69 56 aa6.93□□□□□ -1.3
CD55-209ENST00000488171 A8MU10 97 aa6.91□□□□□ -1.3
CD55-209ENST00000488171 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
CD55-209ENST00000488171 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
CD55-209ENST00000488171 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
CD55-209ENST00000488171 MT1MQ8N339 61 aa6.88□□□□□ -1.31
CD55-209ENST00000488171 MT1LQ93083 61 aa6.87□□□□□ -1.31
CD55-209ENST00000488171 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
CD55-209ENST00000488171 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
CD55-209ENST00000488171 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
CD55-209ENST00000488171 V9GYY9 64 aa6.78□□□□□ -1.32
CD55-209ENST00000488171 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
CD55-209ENST00000488171 TNP1P09430 55 aa6.77□□□□□ -1.33
CD55-209ENST00000488171 Q1T7F1 81 aa6.75□□□□□ -1.33
CD55-209ENST00000488171 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
CD55-209ENST00000488171 MT4P47944 62 aa6.72□□□□□ -1.33
CD55-209ENST00000488171 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
CD55-209ENST00000488171 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.34
CD55-209ENST00000488171 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.35
CD55-209ENST00000488171 PRR15LQ9BU68 103 aa6.65□□□□□ -1.35
CD55-209ENST00000488171 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
CD55-209ENST00000488171 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CD55-209ENST00000488171 PSPHP1O15172 72 aa6.54□□□□□ -1.36
CD55-209ENST00000488171 UQCR11O14957 56 aa6.44□□□□□ -1.38
CD55-209ENST00000488171 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
CD55-209ENST00000488171 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
CD55-209ENST00000488171 A6NED7 52 aa6.4□□□□□ -1.39
CD55-209ENST00000488171 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
CD55-209ENST00000488171 PMAIP1Q13794 54 aa6.36□□□□□ -1.39
CD55-209ENST00000488171 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
CD55-209ENST00000488171 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
CD55-209ENST00000488171 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
CD55-209ENST00000488171 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
CD55-209ENST00000488171 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
CD55-209ENST00000488171 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
CD55-209ENST00000488171 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CD55-209ENST00000488171 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
CD55-209ENST00000488171 K7ERS5 55 aa6.17□□□□□ -1.42
CD55-209ENST00000488171 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
CD55-209ENST00000488171 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
CD55-209ENST00000488171 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
CD55-209ENST00000488171 MT1AP04731 61 aa5.84□□□□□ -1.47
CD55-209ENST00000488171 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
CD55-209ENST00000488171 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
CD55-209ENST00000488171 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
CD55-209ENST00000488171 ROMO1P60602 79 aa5.75□□□□□ -1.49
CD55-209ENST00000488171 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
CD55-209ENST00000488171 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
CD55-209ENST00000488171 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
CD55-209ENST00000488171 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
CD55-209ENST00000488171 MT3P25713 68 aa5.33□□□□□ -1.56
CD55-209ENST00000488171 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
CD55-209ENST00000488171 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
CD55-209ENST00000488171 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
CD55-209ENST00000488171 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
CD55-209ENST00000488171 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
CD55-209ENST00000488171 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
CD55-209ENST00000488171 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
CD55-209ENST00000488171 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
CD55-209ENST00000488171 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
CD55-209ENST00000488171 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
CD55-209ENST00000488171 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
CD55-209ENST00000488171 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
CD55-209ENST00000488171 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
CD55-209ENST00000488171 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
CD55-209ENST00000488171 INE1O15225 51 aa4.16□□□□□ -1.74
CD55-209ENST00000488171 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
CD55-209ENST00000488171 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
CD55-209ENST00000488171 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
CD55-209ENST00000488171 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
CD55-209ENST00000488171 PRM1P04553 51 aa2.94□□□□□ -1.94
CD55-209ENST00000488171 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
CD55-209ENST00000488171 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 54.4 ms