RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-217ENST00000488087 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
ECHDC1-217ENST00000488087 MGAM2Q2M2H8 2515 aa1.27□□□□□ -2.21
ECHDC1-217ENST00000488087 STAB1Q9NY15 2570 aa1.27□□□□□ -2.21
ECHDC1-217ENST00000488087 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
ECHDC1-217ENST00000488087 LPAP08519 4548 aa1.23□□□□□ -2.21
ECHDC1-217ENST00000488087 HYDINQ4G0P3 5121 aa1.21□□□□□ -2.22
ECHDC1-217ENST00000488087 MUC17Q685J3 4493 aa1.2□□□□□ -2.22
ECHDC1-217ENST00000488087 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
ECHDC1-217ENST00000488087 KRTAP19-2Q3LHN2 52 aa1.17□□□□□ -2.22
ECHDC1-217ENST00000488087 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
ECHDC1-217ENST00000488087 KRTAP2-1Q9BYU5 128 aa1.17□□□□□ -2.22
ECHDC1-217ENST00000488087 SMR3BP02814 79 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 KMT2CQ8NEZ4 4911 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 LRP2P98164 4655 aa1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 RYR3Q15413 4870 aa1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 RYR2Q92736 4967 aa1.16□□□□□ -2.22
ECHDC1-217ENST00000488087 RYR1P21817 5038 aa1.13□□□□□ -2.23
ECHDC1-217ENST00000488087 MT1HL1P0DM35 61 aa1.13□□□□□ -2.23
ECHDC1-217ENST00000488087 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-217ENST00000488087 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-217ENST00000488087 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
ECHDC1-217ENST00000488087 BIRC6Q9NR09 4857 aa1.08□□□□□ -2.24
ECHDC1-217ENST00000488087 M0R2T5 61 aa1.08□□□□□ -2.24
ECHDC1-217ENST00000488087 HERC2O95714 4834 aa1.06□□□□□ -2.24
ECHDC1-217ENST00000488087 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
ECHDC1-217ENST00000488087 MT1XP80297 61 aa1.04□□□□□ -2.24
ECHDC1-217ENST00000488087 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-217ENST00000488087 HMCN2Q8NDA2 5059 aa1.03□□□□□ -2.24
ECHDC1-217ENST00000488087 PCLOQ9Y6V0 5065 aa1.01□□□□□ -2.25
ECHDC1-217ENST00000488087 MT1BP07438 61 aa1□□□□□ -2.25
ECHDC1-217ENST00000488087 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
ECHDC1-217ENST00000488087 MUC2Q02817 5179 aa0.98□□□□□ -2.25
ECHDC1-217ENST00000488087 UBR4Q5T4S7 5183 aa0.98□□□□□ -2.25
ECHDC1-217ENST00000488087 KIAA1109Q2LD37 5005 aa0.97□□□□□ -2.25
ECHDC1-217ENST00000488087 MT2AP02795 61 aa0.97□□□□□ -2.25
ECHDC1-217ENST00000488087 MT1AP04731 61 aa0.97□□□□□ -2.25
ECHDC1-217ENST00000488087 MT1EP04732 61 aa0.97□□□□□ -2.25
ECHDC1-217ENST00000488087 MACF1Q9UPN3 7388 aaKnown RBP0.97□□□□□ -2.25
ECHDC1-217ENST00000488087 MT1FP04733 61 aa0.96□□□□□ -2.26
ECHDC1-217ENST00000488087 EPPK1P58107 5090 aaKnown RBP0.95□□□□□ -2.26
ECHDC1-217ENST00000488087 MT1LQ93083 61 aa0.95□□□□□ -2.26
ECHDC1-217ENST00000488087 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
ECHDC1-217ENST00000488087 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
ECHDC1-217ENST00000488087 MT1HP80294 61 aa0.92□□□□□ -2.26
ECHDC1-217ENST00000488087 PRM1P04553 51 aa0.9□□□□□ -2.27
ECHDC1-217ENST00000488087 FAT4Q6V0I7 4981 aa0.87□□□□□ -2.27
ECHDC1-217ENST00000488087 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
ECHDC1-217ENST00000488087 RNF213Q63HN8 5207 aa0.84□□□□□ -2.27
ECHDC1-217ENST00000488087 SPRR2AP35326 72 aa0.84□□□□□ -2.27
ECHDC1-217ENST00000488087 MT1GP13640 62 aa0.83□□□□□ -2.28
ECHDC1-217ENST00000488087 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
ECHDC1-217ENST00000488087 MT1MQ8N339 61 aa0.82□□□□□ -2.28
ECHDC1-217ENST00000488087 SPRR2BP35325 72 aa0.81□□□□□ -2.28
ECHDC1-217ENST00000488087 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
ECHDC1-217ENST00000488087 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
ECHDC1-217ENST00000488087 USH2AO75445 5202 aa0.8□□□□□ -2.28
ECHDC1-217ENST00000488087 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-217ENST00000488087 FSIP2Q5CZC0 6907 aa0.78□□□□□ -2.28
ECHDC1-217ENST00000488087 SPRR2EP22531 72 aa0.78□□□□□ -2.28
ECHDC1-217ENST00000488087 SPRR2DP22532 72 aa0.78□□□□□ -2.28
ECHDC1-217ENST00000488087 SSPOA2VEC9 5147 aa0.78□□□□□ -2.28
ECHDC1-217ENST00000488087 NEBP20929 6669 aa0.77□□□□□ -2.29
ECHDC1-217ENST00000488087 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
ECHDC1-217ENST00000488087 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
ECHDC1-217ENST00000488087 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
ECHDC1-217ENST00000488087 KMT2DO14686 5537 aa0.76□□□□□ -2.29
ECHDC1-217ENST00000488087 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
ECHDC1-217ENST00000488087 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
ECHDC1-217ENST00000488087 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
ECHDC1-217ENST00000488087 KRTAP19-6Q3LI70 58 aa0.71□□□□□ -2.3
ECHDC1-217ENST00000488087 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
ECHDC1-217ENST00000488087 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.3
ECHDC1-217ENST00000488087 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
ECHDC1-217ENST00000488087 KRTAP20-1Q3LI63 56 aa0.42□□□□□ -2.34
ECHDC1-217ENST00000488087 MT4P47944 62 aa0.41□□□□□ -2.34
ECHDC1-217ENST00000488087 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 108.4 ms