RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 A8MU10 97 aa9.11□□□□□ -0.95
RCC1-212ENST00000486790 KRTAP5-10Q6L8G5 202 aa9.07□□□□□ -0.96
RCC1-212ENST00000486790 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
RCC1-212ENST00000486790 PRR15LQ9BU68 103 aa8.98□□□□□ -0.97
RCC1-212ENST00000486790 KRTAP12-3P60328 96 aa8.92□□□□□ -0.98
RCC1-212ENST00000486790 KRTAP5-7Q6L8G8 165 aa8.82□□□□□ -1
RCC1-212ENST00000486790 KRTAP4-7Q9BYR0 210 aa8.81□□□□□ -1
RCC1-212ENST00000486790 KRTAP5-3Q6L8H2 238 aa8.8□□□□□ -1
RCC1-212ENST00000486790 KRTAP20-2Q3LI61 65 aa8.73□□□□□ -1.01
RCC1-212ENST00000486790 SPRR5A0A1B0GTR4 108 aa8.72□□□□□ -1.01
RCC1-212ENST00000486790 KRTAP12-4P60329 112 aa8.71□□□□□ -1.02
RCC1-212ENST00000486790 ANAPC13Q9BS18 74 aa8.69□□□□□ -1.02
RCC1-212ENST00000486790 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
RCC1-212ENST00000486790 KRTAP5-5Q701N2 237 aaPredicted RBP8.66□□□□□ -1.02
RCC1-212ENST00000486790 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
RCC1-212ENST00000486790 UQCR11O14957 56 aa8.59□□□□□ -1.03
RCC1-212ENST00000486790 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
RCC1-212ENST00000486790 KRTAP19-4Q3LI73 84 aa8.55□□□□□ -1.04
RCC1-212ENST00000486790 CCDC179H3BU77 68 aa8.41□□□□□ -1.06
RCC1-212ENST00000486790 K7ERS5 55 aa8.41□□□□□ -1.06
RCC1-212ENST00000486790 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
RCC1-212ENST00000486790 SYNE1Q8NF91 8797 aaKnown RBP8.33□□□□□ -1.08
RCC1-212ENST00000486790 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
RCC1-212ENST00000486790 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
RCC1-212ENST00000486790 TMEM258P61165 79 aa8.21□□□□□ -1.1
RCC1-212ENST00000486790 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
RCC1-212ENST00000486790 LCE3CQ5T5A8 94 aa8.16□□□□□ -1.1
RCC1-212ENST00000486790 KRTAP4-11Q9BYQ6 195 aa8.1□□□□□ -1.11
RCC1-212ENST00000486790 MT1AP04731 61 aa8□□□□□ -1.13
RCC1-212ENST00000486790 KRTAP5-2Q701N4 177 aa7.99□□□□□ -1.13
RCC1-212ENST00000486790 V9GYY9 64 aa7.98□□□□□ -1.13
RCC1-212ENST00000486790 KRTAP6-1Q3LI64 71 aa7.92□□□□□ -1.14
RCC1-212ENST00000486790 PSPHP1O15172 72 aa7.87□□□□□ -1.15
RCC1-212ENST00000486790 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
RCC1-212ENST00000486790 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
RCC1-212ENST00000486790 KRTAP9-4Q9BYQ2 154 aa7.79□□□□□ -1.16
RCC1-212ENST00000486790 KRTAP5-8O75690 187 aa7.77□□□□□ -1.17
RCC1-212ENST00000486790 Q1T7F1 81 aa7.76□□□□□ -1.17
RCC1-212ENST00000486790 KRTAP6-2Q3LI66 62 aa7.68□□□□□ -1.18
RCC1-212ENST00000486790 A6NED7 52 aa7.66□□□□□ -1.18
RCC1-212ENST00000486790 MUC5BQ9HC84 5762 aaPredicted RBP7.61□□□□□ -1.19
RCC1-212ENST00000486790 MUC5ACP98088 5654 aa7.6□□□□□ -1.19
RCC1-212ENST00000486790 ROMO1P60602 79 aa7.6□□□□□ -1.19
RCC1-212ENST00000486790 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
RCC1-212ENST00000486790 AHNAKQ09666 5890 aaKnown RBP7.59□□□□□ -1.19
RCC1-212ENST00000486790 OBSCNQ5VST9 7968 aa7.58□□□□□ -1.2
RCC1-212ENST00000486790 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
RCC1-212ENST00000486790 MT3P25713 68 aa7.41□□□□□ -1.22
RCC1-212ENST00000486790 KRTAP5-1Q6L8H4 278 aa7.23□□□□□ -1.25
RCC1-212ENST00000486790 LCE1EQ5T753 118 aa6.89□□□□□ -1.31
RCC1-212ENST00000486790 LCE1BQ5T7P3 118 aa6.49□□□□□ -1.37
RCC1-212ENST00000486790 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
RCC1-212ENST00000486790 LCE1CQ5T751 118 aa6.38□□□□□ -1.39
RCC1-212ENST00000486790 PCP4P48539 62 aa6.3□□□□□ -1.4
RCC1-212ENST00000486790 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
RCC1-212ENST00000486790 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
RCC1-212ENST00000486790 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
RCC1-212ENST00000486790 LCE1FQ5T754 118 aa5.8□□□□□ -1.48
RCC1-212ENST00000486790 KRTAP5-11Q6L8G4 156 aa5.79□□□□□ -1.48
RCC1-212ENST00000486790 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.73□□□□□ -1.49
RCC1-212ENST00000486790 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
RCC1-212ENST00000486790 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
RCC1-212ENST00000486790 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
RCC1-212ENST00000486790 PHGR1C9JFL3 82 aa5.36□□□□□ -1.55
RCC1-212ENST00000486790 KRTAP21-2Q3LI59 83 aa5.21□□□□□ -1.58
RCC1-212ENST00000486790 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
RCC1-212ENST00000486790 KRTAP4-4Q9BYR3 166 aa4.81□□□□□ -1.64
RCC1-212ENST00000486790 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
RCC1-212ENST00000486790 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
RCC1-212ENST00000486790 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
RCC1-212ENST00000486790 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
RCC1-212ENST00000486790 KRTAP21-1Q3LI58 79 aa4.12□□□□□ -1.75
RCC1-212ENST00000486790 PRM1P04553 51 aa3.81□□□□□ -1.8
RCC1-212ENST00000486790 MUC16Q8WXI7 14507 aa3.32□□□□□ -1.88
RCC1-212ENST00000486790 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
RCC1-212ENST00000486790 H3BS24 57 aa2.79□□□□□ -1.96
RCC1-212ENST00000486790 INE1O15225 51 aa2.62□□□□□ -1.99
RCC1-212ENST00000486790 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms