RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
SSR4-211ENST00000486204 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
SSR4-211ENST00000486204 TNP1P09430 55 aa4.8□□□□□ -1.64
SSR4-211ENST00000486204 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
SSR4-211ENST00000486204 MT1EP04732 61 aa4.79□□□□□ -1.64
SSR4-211ENST00000486204 MT4P47944 62 aa4.77□□□□□ -1.65
SSR4-211ENST00000486204 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
SSR4-211ENST00000486204 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
SSR4-211ENST00000486204 A6NED7 52 aa4.75□□□□□ -1.65
SSR4-211ENST00000486204 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SSR4-211ENST00000486204 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
SSR4-211ENST00000486204 K7ERS5 55 aa4.71□□□□□ -1.66
SSR4-211ENST00000486204 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
SSR4-211ENST00000486204 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
SSR4-211ENST00000486204 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SSR4-211ENST00000486204 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SSR4-211ENST00000486204 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
SSR4-211ENST00000486204 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
SSR4-211ENST00000486204 MT1LQ93083 61 aa4.61□□□□□ -1.67
SSR4-211ENST00000486204 MT1GP13640 62 aa4.59□□□□□ -1.67
SSR4-211ENST00000486204 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
SSR4-211ENST00000486204 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
SSR4-211ENST00000486204 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
SSR4-211ENST00000486204 MT1MQ8N339 61 aa4.55□□□□□ -1.68
SSR4-211ENST00000486204 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SSR4-211ENST00000486204 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
SSR4-211ENST00000486204 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SSR4-211ENST00000486204 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
SSR4-211ENST00000486204 ROMO1P60602 79 aa4.48□□□□□ -1.69
SSR4-211ENST00000486204 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
SSR4-211ENST00000486204 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
SSR4-211ENST00000486204 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
SSR4-211ENST00000486204 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SSR4-211ENST00000486204 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SSR4-211ENST00000486204 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
SSR4-211ENST00000486204 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
SSR4-211ENST00000486204 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SSR4-211ENST00000486204 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SSR4-211ENST00000486204 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
SSR4-211ENST00000486204 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
SSR4-211ENST00000486204 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SSR4-211ENST00000486204 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SSR4-211ENST00000486204 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SSR4-211ENST00000486204 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
SSR4-211ENST00000486204 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SSR4-211ENST00000486204 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
SSR4-211ENST00000486204 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SSR4-211ENST00000486204 MT1AP04731 61 aa3.93□□□□□ -1.78
SSR4-211ENST00000486204 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
SSR4-211ENST00000486204 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
SSR4-211ENST00000486204 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SSR4-211ENST00000486204 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
SSR4-211ENST00000486204 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SSR4-211ENST00000486204 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
SSR4-211ENST00000486204 MT3P25713 68 aa3.55□□□□□ -1.84
SSR4-211ENST00000486204 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SSR4-211ENST00000486204 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
SSR4-211ENST00000486204 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SSR4-211ENST00000486204 H3BS24 57 aa3.26□□□□□ -1.89
SSR4-211ENST00000486204 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SSR4-211ENST00000486204 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
SSR4-211ENST00000486204 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
SSR4-211ENST00000486204 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
SSR4-211ENST00000486204 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SSR4-211ENST00000486204 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SSR4-211ENST00000486204 LCE1CQ5T751 118 aa3□□□□□ -1.93
SSR4-211ENST00000486204 INE1O15225 51 aa2.92□□□□□ -1.94
SSR4-211ENST00000486204 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
SSR4-211ENST00000486204 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SSR4-211ENST00000486204 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SSR4-211ENST00000486204 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SSR4-211ENST00000486204 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SSR4-211ENST00000486204 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
SSR4-211ENST00000486204 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SSR4-211ENST00000486204 PRM1P04553 51 aa2.31□□□□□ -2.04
SSR4-211ENST00000486204 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SSR4-211ENST00000486204 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SSR4-211ENST00000486204 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms