RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
TMEM39A-208ENST00000486159 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
TMEM39A-208ENST00000486159 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
TMEM39A-208ENST00000486159 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
TMEM39A-208ENST00000486159 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
TMEM39A-208ENST00000486159 ROMO1P60602 79 aa4.1□□□□□ -1.75
TMEM39A-208ENST00000486159 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
TMEM39A-208ENST00000486159 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
TMEM39A-208ENST00000486159 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
TMEM39A-208ENST00000486159 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
TMEM39A-208ENST00000486159 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
TMEM39A-208ENST00000486159 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
TMEM39A-208ENST00000486159 SPRR2EP22531 72 aa3.94□□□□□ -1.78
TMEM39A-208ENST00000486159 SPRR2BP35325 72 aa3.94□□□□□ -1.78
TMEM39A-208ENST00000486159 SPRR2AP35326 72 aa3.94□□□□□ -1.78
TMEM39A-208ENST00000486159 MT1XP80297 61 aa3.93□□□□□ -1.78
TMEM39A-208ENST00000486159 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
TMEM39A-208ENST00000486159 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
TMEM39A-208ENST00000486159 MT3P25713 68 aa3.9□□□□□ -1.79
TMEM39A-208ENST00000486159 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
TMEM39A-208ENST00000486159 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-208ENST00000486159 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
TMEM39A-208ENST00000486159 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
TMEM39A-208ENST00000486159 TNP1P09430 55 aa3.84□□□□□ -1.79
TMEM39A-208ENST00000486159 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
TMEM39A-208ENST00000486159 SPRR2DP22532 72 aa3.82□□□□□ -1.8
TMEM39A-208ENST00000486159 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
TMEM39A-208ENST00000486159 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
TMEM39A-208ENST00000486159 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-208ENST00000486159 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
TMEM39A-208ENST00000486159 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
TMEM39A-208ENST00000486159 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
TMEM39A-208ENST00000486159 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
TMEM39A-208ENST00000486159 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
TMEM39A-208ENST00000486159 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
TMEM39A-208ENST00000486159 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
TMEM39A-208ENST00000486159 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
TMEM39A-208ENST00000486159 MT1EP04732 61 aa3.48□□□□□ -1.85
TMEM39A-208ENST00000486159 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
TMEM39A-208ENST00000486159 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
TMEM39A-208ENST00000486159 MT4P47944 62 aa3.44□□□□□ -1.86
TMEM39A-208ENST00000486159 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TMEM39A-208ENST00000486159 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-208ENST00000486159 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
TMEM39A-208ENST00000486159 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
TMEM39A-208ENST00000486159 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
TMEM39A-208ENST00000486159 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
TMEM39A-208ENST00000486159 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
TMEM39A-208ENST00000486159 MT1GP13640 62 aa3.33□□□□□ -1.88
TMEM39A-208ENST00000486159 MT1MQ8N339 61 aa3.32□□□□□ -1.88
TMEM39A-208ENST00000486159 MT1LQ93083 61 aa3.3□□□□□ -1.88
TMEM39A-208ENST00000486159 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
TMEM39A-208ENST00000486159 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
TMEM39A-208ENST00000486159 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
TMEM39A-208ENST00000486159 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
TMEM39A-208ENST00000486159 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
TMEM39A-208ENST00000486159 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
TMEM39A-208ENST00000486159 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
TMEM39A-208ENST00000486159 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TMEM39A-208ENST00000486159 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
TMEM39A-208ENST00000486159 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
TMEM39A-208ENST00000486159 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
TMEM39A-208ENST00000486159 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
TMEM39A-208ENST00000486159 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
TMEM39A-208ENST00000486159 INE1O15225 51 aa2.8□□□□□ -1.96
TMEM39A-208ENST00000486159 MT1AP04731 61 aa2.78□□□□□ -1.96
TMEM39A-208ENST00000486159 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
TMEM39A-208ENST00000486159 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TMEM39A-208ENST00000486159 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
TMEM39A-208ENST00000486159 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
TMEM39A-208ENST00000486159 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
TMEM39A-208ENST00000486159 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
TMEM39A-208ENST00000486159 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
TMEM39A-208ENST00000486159 PRM1P04553 51 aa2.1□□□□□ -2.07
TMEM39A-208ENST00000486159 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
TMEM39A-208ENST00000486159 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
TMEM39A-208ENST00000486159 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TMEM39A-208ENST00000486159 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 95.6 ms