RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 MT1MQ8N339 61 aa4.88□□□□□ -1.63
SCAF4-206ENST00000485790 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
SCAF4-206ENST00000485790 TNP1P09430 55 aa4.87□□□□□ -1.63
SCAF4-206ENST00000485790 MT4P47944 62 aa4.86□□□□□ -1.63
SCAF4-206ENST00000485790 MT1LQ93083 61 aa4.86□□□□□ -1.63
SCAF4-206ENST00000485790 H7BZZ5 65 aa4.85□□□□□ -1.63
SCAF4-206ENST00000485790 A8MU10 97 aa4.81□□□□□ -1.64
SCAF4-206ENST00000485790 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
SCAF4-206ENST00000485790 LCE3AQ5TA76 89 aa4.79□□□□□ -1.64
SCAF4-206ENST00000485790 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
SCAF4-206ENST00000485790 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
SCAF4-206ENST00000485790 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
SCAF4-206ENST00000485790 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
SCAF4-206ENST00000485790 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
SCAF4-206ENST00000485790 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
SCAF4-206ENST00000485790 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
SCAF4-206ENST00000485790 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
SCAF4-206ENST00000485790 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
SCAF4-206ENST00000485790 UQCR11O14957 56 aa4.57□□□□□ -1.68
SCAF4-206ENST00000485790 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SCAF4-206ENST00000485790 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
SCAF4-206ENST00000485790 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
SCAF4-206ENST00000485790 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SCAF4-206ENST00000485790 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
SCAF4-206ENST00000485790 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
SCAF4-206ENST00000485790 K7ERS5 55 aa4.47□□□□□ -1.69
SCAF4-206ENST00000485790 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
SCAF4-206ENST00000485790 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
SCAF4-206ENST00000485790 TMEM258P61165 79 aa4.38□□□□□ -1.71
SCAF4-206ENST00000485790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
SCAF4-206ENST00000485790 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
SCAF4-206ENST00000485790 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
SCAF4-206ENST00000485790 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SCAF4-206ENST00000485790 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
SCAF4-206ENST00000485790 V9GYY9 64 aa4.28□□□□□ -1.72
SCAF4-206ENST00000485790 PSPHP1O15172 72 aa4.21□□□□□ -1.74
SCAF4-206ENST00000485790 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
SCAF4-206ENST00000485790 Q1T7F1 81 aa4.16□□□□□ -1.74
SCAF4-206ENST00000485790 MT1AP04731 61 aa4.14□□□□□ -1.75
SCAF4-206ENST00000485790 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
SCAF4-206ENST00000485790 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
SCAF4-206ENST00000485790 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SCAF4-206ENST00000485790 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SCAF4-206ENST00000485790 A6NED7 52 aa4.09□□□□□ -1.75
SCAF4-206ENST00000485790 ROMO1P60602 79 aa4.05□□□□□ -1.76
SCAF4-206ENST00000485790 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
SCAF4-206ENST00000485790 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SCAF4-206ENST00000485790 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
SCAF4-206ENST00000485790 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
SCAF4-206ENST00000485790 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SCAF4-206ENST00000485790 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
SCAF4-206ENST00000485790 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
SCAF4-206ENST00000485790 MT3P25713 68 aa3.86□□□□□ -1.79
SCAF4-206ENST00000485790 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
SCAF4-206ENST00000485790 PCP4P48539 62 aa3.76□□□□□ -1.81
SCAF4-206ENST00000485790 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
SCAF4-206ENST00000485790 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SCAF4-206ENST00000485790 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
SCAF4-206ENST00000485790 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
SCAF4-206ENST00000485790 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SCAF4-206ENST00000485790 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
SCAF4-206ENST00000485790 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
SCAF4-206ENST00000485790 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
SCAF4-206ENST00000485790 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
SCAF4-206ENST00000485790 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SCAF4-206ENST00000485790 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
SCAF4-206ENST00000485790 PRO0628Q9UI54 55 aa2.94□□□□□ -1.94
SCAF4-206ENST00000485790 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
SCAF4-206ENST00000485790 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
SCAF4-206ENST00000485790 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SCAF4-206ENST00000485790 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SCAF4-206ENST00000485790 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
SCAF4-206ENST00000485790 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
SCAF4-206ENST00000485790 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SCAF4-206ENST00000485790 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SCAF4-206ENST00000485790 PRM1P04553 51 aa2.02□□□□□ -2.09
SCAF4-206ENST00000485790 INE1O15225 51 aa1.68□□□□□ -2.14
SCAF4-206ENST00000485790 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms