RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
SREBF1-213ENST00000485080 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
SREBF1-213ENST00000485080 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
SREBF1-213ENST00000485080 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
SREBF1-213ENST00000485080 PSPHP1O15172 72 aa6.66□□□□□ -1.34
SREBF1-213ENST00000485080 TNP1P09430 55 aa6.65□□□□□ -1.34
SREBF1-213ENST00000485080 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
SREBF1-213ENST00000485080 SPRR2DP22532 72 aa6.62□□□□□ -1.35
SREBF1-213ENST00000485080 MT1EP04732 61 aa6.61□□□□□ -1.35
SREBF1-213ENST00000485080 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
SREBF1-213ENST00000485080 K7ERS5 55 aa6.53□□□□□ -1.36
SREBF1-213ENST00000485080 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
SREBF1-213ENST00000485080 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
SREBF1-213ENST00000485080 A6NED7 52 aa6.49□□□□□ -1.37
SREBF1-213ENST00000485080 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
SREBF1-213ENST00000485080 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
SREBF1-213ENST00000485080 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
SREBF1-213ENST00000485080 PRO0628Q9UI54 55 aa6.44□□□□□ -1.38
SREBF1-213ENST00000485080 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
SREBF1-213ENST00000485080 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
SREBF1-213ENST00000485080 MT1GP13640 62 aa6.4□□□□□ -1.38
SREBF1-213ENST00000485080 MT1LQ93083 61 aa6.35□□□□□ -1.39
SREBF1-213ENST00000485080 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
SREBF1-213ENST00000485080 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
SREBF1-213ENST00000485080 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
SREBF1-213ENST00000485080 MT1MQ8N339 61 aa6.27□□□□□ -1.41
SREBF1-213ENST00000485080 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
SREBF1-213ENST00000485080 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
SREBF1-213ENST00000485080 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
SREBF1-213ENST00000485080 ROMO1P60602 79 aa6.14□□□□□ -1.43
SREBF1-213ENST00000485080 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
SREBF1-213ENST00000485080 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
SREBF1-213ENST00000485080 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
SREBF1-213ENST00000485080 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
SREBF1-213ENST00000485080 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
SREBF1-213ENST00000485080 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.48
SREBF1-213ENST00000485080 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
SREBF1-213ENST00000485080 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
SREBF1-213ENST00000485080 MT4P47944 62 aa5.73□□□□□ -1.49
SREBF1-213ENST00000485080 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
SREBF1-213ENST00000485080 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SREBF1-213ENST00000485080 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
SREBF1-213ENST00000485080 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
SREBF1-213ENST00000485080 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
SREBF1-213ENST00000485080 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
SREBF1-213ENST00000485080 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
SREBF1-213ENST00000485080 MT1AP04731 61 aa5.41□□□□□ -1.54
SREBF1-213ENST00000485080 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
SREBF1-213ENST00000485080 KRTAP5-10Q6L8G5 202 aa5.32□□□□□ -1.56
SREBF1-213ENST00000485080 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
SREBF1-213ENST00000485080 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
SREBF1-213ENST00000485080 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
SREBF1-213ENST00000485080 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
SREBF1-213ENST00000485080 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
SREBF1-213ENST00000485080 MT3P25713 68 aa4.95□□□□□ -1.62
SREBF1-213ENST00000485080 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
SREBF1-213ENST00000485080 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
SREBF1-213ENST00000485080 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
SREBF1-213ENST00000485080 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
SREBF1-213ENST00000485080 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SREBF1-213ENST00000485080 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
SREBF1-213ENST00000485080 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
SREBF1-213ENST00000485080 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
SREBF1-213ENST00000485080 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
SREBF1-213ENST00000485080 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
SREBF1-213ENST00000485080 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
SREBF1-213ENST00000485080 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
SREBF1-213ENST00000485080 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
SREBF1-213ENST00000485080 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
SREBF1-213ENST00000485080 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
SREBF1-213ENST00000485080 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
SREBF1-213ENST00000485080 INE1O15225 51 aa3.88□□□□□ -1.79
SREBF1-213ENST00000485080 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SREBF1-213ENST00000485080 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SREBF1-213ENST00000485080 PRM1P04553 51 aa3.12□□□□□ -1.91
SREBF1-213ENST00000485080 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SREBF1-213ENST00000485080 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SREBF1-213ENST00000485080 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 27.5 ms