RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
SNRNP200-206ENST00000484372 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
SNRNP200-206ENST00000484372 KRTAP19-3Q7Z4W3 81 aa4.45□□□□□ -1.7
SNRNP200-206ENST00000484372 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
SNRNP200-206ENST00000484372 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
SNRNP200-206ENST00000484372 H3BS24 57 aa4.44□□□□□ -1.7
SNRNP200-206ENST00000484372 MT1EP04732 61 aa4.44□□□□□ -1.7
SNRNP200-206ENST00000484372 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
SNRNP200-206ENST00000484372 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
SNRNP200-206ENST00000484372 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
SNRNP200-206ENST00000484372 TNP1P09430 55 aa4.36□□□□□ -1.71
SNRNP200-206ENST00000484372 MT1GP13640 62 aa4.36□□□□□ -1.71
SNRNP200-206ENST00000484372 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
SNRNP200-206ENST00000484372 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
SNRNP200-206ENST00000484372 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
SNRNP200-206ENST00000484372 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
SNRNP200-206ENST00000484372 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SNRNP200-206ENST00000484372 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
SNRNP200-206ENST00000484372 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SNRNP200-206ENST00000484372 MT1MQ8N339 61 aa4.24□□□□□ -1.73
SNRNP200-206ENST00000484372 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SNRNP200-206ENST00000484372 ROMO1P60602 79 aa4.23□□□□□ -1.73
SNRNP200-206ENST00000484372 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
SNRNP200-206ENST00000484372 MT1LQ93083 61 aa4.23□□□□□ -1.73
SNRNP200-206ENST00000484372 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
SNRNP200-206ENST00000484372 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
SNRNP200-206ENST00000484372 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
SNRNP200-206ENST00000484372 MT4P47944 62 aa4.17□□□□□ -1.74
SNRNP200-206ENST00000484372 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
SNRNP200-206ENST00000484372 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
SNRNP200-206ENST00000484372 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
SNRNP200-206ENST00000484372 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SNRNP200-206ENST00000484372 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
SNRNP200-206ENST00000484372 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
SNRNP200-206ENST00000484372 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
SNRNP200-206ENST00000484372 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
SNRNP200-206ENST00000484372 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
SNRNP200-206ENST00000484372 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
SNRNP200-206ENST00000484372 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SNRNP200-206ENST00000484372 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SNRNP200-206ENST00000484372 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
SNRNP200-206ENST00000484372 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
SNRNP200-206ENST00000484372 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SNRNP200-206ENST00000484372 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
SNRNP200-206ENST00000484372 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
SNRNP200-206ENST00000484372 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
SNRNP200-206ENST00000484372 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SNRNP200-206ENST00000484372 MT1AP04731 61 aa3.61□□□□□ -1.83
SNRNP200-206ENST00000484372 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
SNRNP200-206ENST00000484372 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SNRNP200-206ENST00000484372 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
SNRNP200-206ENST00000484372 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
SNRNP200-206ENST00000484372 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SNRNP200-206ENST00000484372 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
SNRNP200-206ENST00000484372 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
SNRNP200-206ENST00000484372 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SNRNP200-206ENST00000484372 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
SNRNP200-206ENST00000484372 MT3P25713 68 aa3.35□□□□□ -1.87
SNRNP200-206ENST00000484372 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SNRNP200-206ENST00000484372 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
SNRNP200-206ENST00000484372 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
SNRNP200-206ENST00000484372 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
SNRNP200-206ENST00000484372 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SNRNP200-206ENST00000484372 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SNRNP200-206ENST00000484372 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
SNRNP200-206ENST00000484372 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SNRNP200-206ENST00000484372 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
SNRNP200-206ENST00000484372 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SNRNP200-206ENST00000484372 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
SNRNP200-206ENST00000484372 LCE1FQ5T754 118 aa2.57□□□□□ -2
SNRNP200-206ENST00000484372 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SNRNP200-206ENST00000484372 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SNRNP200-206ENST00000484372 INE1O15225 51 aa2.34□□□□□ -2.03
SNRNP200-206ENST00000484372 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
SNRNP200-206ENST00000484372 PRM1P04553 51 aa2.17□□□□□ -2.06
SNRNP200-206ENST00000484372 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SNRNP200-206ENST00000484372 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SNRNP200-206ENST00000484372 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.2 ms