RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
NUP50-215ENST00000484186 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
NUP50-215ENST00000484186 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
NUP50-215ENST00000484186 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
NUP50-215ENST00000484186 V9GYY9 64 aa3.46□□□□□ -1.86
NUP50-215ENST00000484186 UQCR11O14957 56 aa3.44□□□□□ -1.86
NUP50-215ENST00000484186 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
NUP50-215ENST00000484186 MT1GP13640 62 aa3.43□□□□□ -1.86
NUP50-215ENST00000484186 PCP4P48539 62 aa3.43□□□□□ -1.86
NUP50-215ENST00000484186 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
NUP50-215ENST00000484186 A8MU10 97 aa3.42□□□□□ -1.86
NUP50-215ENST00000484186 Q1T7F1 81 aa3.41□□□□□ -1.86
NUP50-215ENST00000484186 RPS28P62857 69 aaKnown RBP3.39□□□□□ -1.87
NUP50-215ENST00000484186 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
NUP50-215ENST00000484186 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
NUP50-215ENST00000484186 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
NUP50-215ENST00000484186 MT1MQ8N339 61 aa3.35□□□□□ -1.87
NUP50-215ENST00000484186 MT1LQ93083 61 aa3.35□□□□□ -1.87
NUP50-215ENST00000484186 PSPHP1O15172 72 aa3.34□□□□□ -1.87
NUP50-215ENST00000484186 TNP1P09430 55 aa3.32□□□□□ -1.88
NUP50-215ENST00000484186 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
NUP50-215ENST00000484186 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
NUP50-215ENST00000484186 K7ERS5 55 aa3.3□□□□□ -1.88
NUP50-215ENST00000484186 MT4P47944 62 aa3.29□□□□□ -1.88
NUP50-215ENST00000484186 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
NUP50-215ENST00000484186 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
NUP50-215ENST00000484186 A6NED7 52 aa3.26□□□□□ -1.89
NUP50-215ENST00000484186 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
NUP50-215ENST00000484186 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
NUP50-215ENST00000484186 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
NUP50-215ENST00000484186 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
NUP50-215ENST00000484186 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
NUP50-215ENST00000484186 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
NUP50-215ENST00000484186 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
NUP50-215ENST00000484186 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
NUP50-215ENST00000484186 ROMO1P60602 79 aa3.07□□□□□ -1.92
NUP50-215ENST00000484186 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
NUP50-215ENST00000484186 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
NUP50-215ENST00000484186 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
NUP50-215ENST00000484186 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
NUP50-215ENST00000484186 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
NUP50-215ENST00000484186 KRTAP15-1Q3LI76 137 aa2.96□□□□□ -1.94
NUP50-215ENST00000484186 BRK1Q8WUW1 75 aa2.94□□□□□ -1.94
NUP50-215ENST00000484186 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
NUP50-215ENST00000484186 MT1AP04731 61 aa2.85□□□□□ -1.95
NUP50-215ENST00000484186 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
NUP50-215ENST00000484186 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
NUP50-215ENST00000484186 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
NUP50-215ENST00000484186 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
NUP50-215ENST00000484186 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
NUP50-215ENST00000484186 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
NUP50-215ENST00000484186 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
NUP50-215ENST00000484186 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
NUP50-215ENST00000484186 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
NUP50-215ENST00000484186 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
NUP50-215ENST00000484186 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
NUP50-215ENST00000484186 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
NUP50-215ENST00000484186 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
NUP50-215ENST00000484186 MT3P25713 68 aa2.62□□□□□ -1.99
NUP50-215ENST00000484186 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
NUP50-215ENST00000484186 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
NUP50-215ENST00000484186 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
NUP50-215ENST00000484186 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
NUP50-215ENST00000484186 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
NUP50-215ENST00000484186 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
NUP50-215ENST00000484186 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
NUP50-215ENST00000484186 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
NUP50-215ENST00000484186 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
NUP50-215ENST00000484186 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
NUP50-215ENST00000484186 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
NUP50-215ENST00000484186 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
NUP50-215ENST00000484186 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NUP50-215ENST00000484186 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
NUP50-215ENST00000484186 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
NUP50-215ENST00000484186 INE1O15225 51 aa1.6□□□□□ -2.15
NUP50-215ENST00000484186 PRM1P04553 51 aa1.55□□□□□ -2.16
NUP50-215ENST00000484186 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
NUP50-215ENST00000484186 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 74.3 ms