RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.18
FNDC3A-203ENST00000484074 KRTAP4-7Q9BYR0 210 aa1.4□□□□□ -2.19
FNDC3A-203ENST00000484074 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.19
FNDC3A-203ENST00000484074 KRTAP9-4Q9BYQ2 154 aa1.4□□□□□ -2.19
FNDC3A-203ENST00000484074 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
FNDC3A-203ENST00000484074 LCE3DQ9BYE3 92 aa1.38□□□□□ -2.19
FNDC3A-203ENST00000484074 LCE3EQ5T5B0 92 aa1.37□□□□□ -2.19
FNDC3A-203ENST00000484074 LCE1BQ5T7P3 118 aa1.37□□□□□ -2.19
FNDC3A-203ENST00000484074 LRP1Q07954 4544 aaKnown RBP1.37□□□□□ -2.19
FNDC3A-203ENST00000484074 KRTAP19-8Q3LI54 63 aa1.36□□□□□ -2.19
FNDC3A-203ENST00000484074 LCE5AQ5TCM9 118 aa1.36□□□□□ -2.19
FNDC3A-203ENST00000484074 FAT4Q6V0I7 4981 aa1.35□□□□□ -2.19
FNDC3A-203ENST00000484074 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
FNDC3A-203ENST00000484074 LCE1DQ5T752 114 aa1.35□□□□□ -2.19
FNDC3A-203ENST00000484074 KRTAP19-3Q7Z4W3 81 aa1.33□□□□□ -2.2
FNDC3A-203ENST00000484074 LRP2P98164 4655 aa1.33□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
FNDC3A-203ENST00000484074 MT1XP80297 61 aa1.32□□□□□ -2.2
FNDC3A-203ENST00000484074 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
FNDC3A-203ENST00000484074 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
FNDC3A-203ENST00000484074 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
FNDC3A-203ENST00000484074 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP9-7A8MTY7 169 aa1.3□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP19-6Q3LI70 58 aa1.3□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP4-9Q9BYQ8 210 aa1.29□□□□□ -2.2
FNDC3A-203ENST00000484074 LPAP08519 4548 aa1.29□□□□□ -2.2
FNDC3A-203ENST00000484074 MT1BP07438 61 aa1.29□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP9-3Q9BYQ3 159 aa1.29□□□□□ -2.2
FNDC3A-203ENST00000484074 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
FNDC3A-203ENST00000484074 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
FNDC3A-203ENST00000484074 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
FNDC3A-203ENST00000484074 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
FNDC3A-203ENST00000484074 LCE1EQ5T753 118 aa1.27□□□□□ -2.21
FNDC3A-203ENST00000484074 LCE1AQ5T7P2 110 aa1.27□□□□□ -2.21
FNDC3A-203ENST00000484074 MUC2Q02817 5179 aa1.26□□□□□ -2.21
FNDC3A-203ENST00000484074 LCE4AQ5TA78 99 aa1.26□□□□□ -2.21
FNDC3A-203ENST00000484074 USH2AO75445 5202 aa1.26□□□□□ -2.21
FNDC3A-203ENST00000484074 MT1LQ93083 61 aa1.25□□□□□ -2.21
FNDC3A-203ENST00000484074 KMT2DO14686 5537 aa1.25□□□□□ -2.21
FNDC3A-203ENST00000484074 MT1EP04732 61 aa1.23□□□□□ -2.21
FNDC3A-203ENST00000484074 MT1MQ8N339 61 aa1.23□□□□□ -2.21
FNDC3A-203ENST00000484074 KRTAP6-3Q3LI67 103 aa1.22□□□□□ -2.21
FNDC3A-203ENST00000484074 KRTAP5-9P26371 169 aa1.21□□□□□ -2.22
FNDC3A-203ENST00000484074 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
FNDC3A-203ENST00000484074 PRM1P04553 51 aa1.2□□□□□ -2.22
FNDC3A-203ENST00000484074 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
FNDC3A-203ENST00000484074 KRTAP4-11Q9BYQ6 195 aa1.16□□□□□ -2.22
FNDC3A-203ENST00000484074 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
FNDC3A-203ENST00000484074 MT1AP04731 61 aa1.15□□□□□ -2.22
FNDC3A-203ENST00000484074 SSPOA2VEC9 5147 aa1.15□□□□□ -2.23
FNDC3A-203ENST00000484074 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.23
FNDC3A-203ENST00000484074 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
FNDC3A-203ENST00000484074 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
FNDC3A-203ENST00000484074 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
FNDC3A-203ENST00000484074 KRTAP5-4Q6L8H1 288 aa1.11□□□□□ -2.23
FNDC3A-203ENST00000484074 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
FNDC3A-203ENST00000484074 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
FNDC3A-203ENST00000484074 NEBP20929 6669 aa1.06□□□□□ -2.24
FNDC3A-203ENST00000484074 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
FNDC3A-203ENST00000484074 KRTAP5-8O75690 187 aa1.03□□□□□ -2.24
FNDC3A-203ENST00000484074 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
FNDC3A-203ENST00000484074 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
FNDC3A-203ENST00000484074 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
FNDC3A-203ENST00000484074 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
FNDC3A-203ENST00000484074 KRTAP9-6A8MVA2 160 aa0.98□□□□□ -2.25
FNDC3A-203ENST00000484074 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
FNDC3A-203ENST00000484074 KRTAP4-4Q9BYR3 166 aa0.93□□□□□ -2.26
FNDC3A-203ENST00000484074 KRTAP5-11Q6L8G4 156 aa0.87□□□□□ -2.27
FNDC3A-203ENST00000484074 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
FNDC3A-203ENST00000484074 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
FNDC3A-203ENST00000484074 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
FNDC3A-203ENST00000484074 KRTAP5-1Q6L8H4 278 aa0.82□□□□□ -2.28
FNDC3A-203ENST00000484074 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
FNDC3A-203ENST00000484074 MUC5ACP98088 5654 aa0.78□□□□□ -2.28
FNDC3A-203ENST00000484074 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
FNDC3A-203ENST00000484074 KRTAP21-2Q3LI59 83 aa0.55□□□□□ -2.32
FNDC3A-203ENST00000484074 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms