RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
FXR1-217ENST00000484042 SMR3BP02814 79 aaPredicted RBP1.86□□□□□ -2.11
FXR1-217ENST00000484042 HERC1Q15751 4861 aa1.85□□□□□ -2.11
FXR1-217ENST00000484042 S4R3F8 94 aa1.85□□□□□ -2.11
FXR1-217ENST00000484042 ROMO1P60602 79 aa1.84□□□□□ -2.11
FXR1-217ENST00000484042 Q5VSD8 79 aa1.84□□□□□ -2.11
FXR1-217ENST00000484042 BIRC6Q9NR09 4857 aa1.84□□□□□ -2.12
FXR1-217ENST00000484042 LPAP08519 4548 aa1.83□□□□□ -2.12
FXR1-217ENST00000484042 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
FXR1-217ENST00000484042 M0QZ58 72 aa1.82□□□□□ -2.12
FXR1-217ENST00000484042 HERC2O95714 4834 aa1.82□□□□□ -2.12
FXR1-217ENST00000484042 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
FXR1-217ENST00000484042 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
FXR1-217ENST00000484042 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
FXR1-217ENST00000484042 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
FXR1-217ENST00000484042 A0A0D9SG42 100 aa1.72□□□□□ -2.13
FXR1-217ENST00000484042 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
FXR1-217ENST00000484042 C10orf95Q9H7T3 257 aa1.7□□□□□ -2.14
FXR1-217ENST00000484042 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
FXR1-217ENST00000484042 INE1O15225 51 aa1.67□□□□□ -2.14
FXR1-217ENST00000484042 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
FXR1-217ENST00000484042 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
FXR1-217ENST00000484042 MUC2Q02817 5179 aa1.62□□□□□ -2.15
FXR1-217ENST00000484042 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
FXR1-217ENST00000484042 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.15
FXR1-217ENST00000484042 TNP1P09430 55 aa1.59□□□□□ -2.15
FXR1-217ENST00000484042 KRTAP19-8Q3LI54 63 aa1.58□□□□□ -2.16
FXR1-217ENST00000484042 UBR4Q5T4S7 5183 aa1.58□□□□□ -2.16
FXR1-217ENST00000484042 MT1HP80294 61 aa1.54□□□□□ -2.16
FXR1-217ENST00000484042 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
FXR1-217ENST00000484042 MT2AP02795 61 aa1.53□□□□□ -2.16
FXR1-217ENST00000484042 MT1FP04733 61 aa1.51□□□□□ -2.17
FXR1-217ENST00000484042 MT1BP07438 61 aa1.5□□□□□ -2.17
FXR1-217ENST00000484042 MT1XP80297 61 aa1.49□□□□□ -2.17
FXR1-217ENST00000484042 USH2AO75445 5202 aa1.41□□□□□ -2.18
FXR1-217ENST00000484042 M0R2T5 61 aa1.41□□□□□ -2.18
FXR1-217ENST00000484042 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
FXR1-217ENST00000484042 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
FXR1-217ENST00000484042 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
FXR1-217ENST00000484042 KRTAP19-5Q3LI72 72 aa1.33□□□□□ -2.2
FXR1-217ENST00000484042 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
FXR1-217ENST00000484042 KRTAP2-1Q9BYU5 128 aa1.33□□□□□ -2.2
FXR1-217ENST00000484042 KMT2DO14686 5537 aa1.32□□□□□ -2.2
FXR1-217ENST00000484042 MT1EP04732 61 aa1.3□□□□□ -2.2
FXR1-217ENST00000484042 KRTAP19-6Q3LI70 58 aa1.3□□□□□ -2.2
FXR1-217ENST00000484042 MT1LQ93083 61 aa1.29□□□□□ -2.2
FXR1-217ENST00000484042 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
FXR1-217ENST00000484042 MT1MQ8N339 61 aa1.21□□□□□ -2.22
FXR1-217ENST00000484042 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
FXR1-217ENST00000484042 MT1GP13640 62 aa1.2□□□□□ -2.22
FXR1-217ENST00000484042 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
FXR1-217ENST00000484042 MT1AP04731 61 aa1.14□□□□□ -2.23
FXR1-217ENST00000484042 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
FXR1-217ENST00000484042 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.24
FXR1-217ENST00000484042 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
FXR1-217ENST00000484042 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
FXR1-217ENST00000484042 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
FXR1-217ENST00000484042 FSIP2Q5CZC0 6907 aa1.02□□□□□ -2.25
FXR1-217ENST00000484042 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
FXR1-217ENST00000484042 MACF1Q9UPN3 7388 aaKnown RBP1□□□□□ -2.25
FXR1-217ENST00000484042 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
FXR1-217ENST00000484042 SPRR2EP22531 72 aa0.97□□□□□ -2.25
FXR1-217ENST00000484042 SPRR2BP35325 72 aa0.97□□□□□ -2.25
FXR1-217ENST00000484042 SPRR2AP35326 72 aa0.97□□□□□ -2.25
FXR1-217ENST00000484042 PRM1P04553 51 aa0.95□□□□□ -2.26
FXR1-217ENST00000484042 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
FXR1-217ENST00000484042 SYNE2Q8WXH0 6885 aaKnown RBP0.94□□□□□ -2.26
FXR1-217ENST00000484042 SPRR2DP22532 72 aa0.93□□□□□ -2.26
FXR1-217ENST00000484042 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
FXR1-217ENST00000484042 NEBP20929 6669 aa0.89□□□□□ -2.27
FXR1-217ENST00000484042 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
FXR1-217ENST00000484042 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
FXR1-217ENST00000484042 MT4P47944 62 aa0.76□□□□□ -2.29
FXR1-217ENST00000484042 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
FXR1-217ENST00000484042 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
FXR1-217ENST00000484042 GPR98Q8WXG9 6306 aa0.66□□□□□ -2.3
FXR1-217ENST00000484042 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
FXR1-217ENST00000484042 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms