RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
PKP4-212ENST00000483881 DNAH17Q9UFH2 4485 aa1.45□□□□□ -2.18
PKP4-212ENST00000483881 SPRR1BP22528 89 aa1.45□□□□□ -2.18
PKP4-212ENST00000483881 COX6B2Q6YFQ2 88 aa1.45□□□□□ -2.18
PKP4-212ENST00000483881 DNAH8Q96JB1 4490 aa1.44□□□□□ -2.18
PKP4-212ENST00000483881 KRTAP13-1Q8IUC0 172 aa1.44□□□□□ -2.18
PKP4-212ENST00000483881 MRPL34Q9BQ48 92 aaKnown RBP1.44□□□□□ -2.18
PKP4-212ENST00000483881 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
PKP4-212ENST00000483881 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
PKP4-212ENST00000483881 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
PKP4-212ENST00000483881 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
PKP4-212ENST00000483881 PKHD1L1Q86WI1 4243 aa1.43□□□□□ -2.18
PKP4-212ENST00000483881 DNAH6Q9C0G6 4158 aa1.43□□□□□ -2.18
PKP4-212ENST00000483881 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
PKP4-212ENST00000483881 FAT1Q14517 4588 aa1.41□□□□□ -2.18
PKP4-212ENST00000483881 LRP1BQ9NZR2 4599 aa1.41□□□□□ -2.18
PKP4-212ENST00000483881 RPL37P61927 97 aaKnown RBP1.41□□□□□ -2.18
PKP4-212ENST00000483881 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
PKP4-212ENST00000483881 LRP1Q07954 4544 aaKnown RBP1.4□□□□□ -2.19
PKP4-212ENST00000483881 APOBP04114 4563 aaKnown RBP1.39□□□□□ -2.19
PKP4-212ENST00000483881 SPINK6Q6UWN8 80 aa1.38□□□□□ -2.19
PKP4-212ENST00000483881 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
PKP4-212ENST00000483881 PKD1P98161 4303 aa1.36□□□□□ -2.19
PKP4-212ENST00000483881 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
PKP4-212ENST00000483881 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
PKP4-212ENST00000483881 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
PKP4-212ENST00000483881 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
PKP4-212ENST00000483881 Q5VSD8 79 aa1.31□□□□□ -2.2
PKP4-212ENST00000483881 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
PKP4-212ENST00000483881 C9orf92A6NGG3 77 aa1.29□□□□□ -2.2
PKP4-212ENST00000483881 SPINK1P00995 79 aa1.29□□□□□ -2.2
PKP4-212ENST00000483881 S4R3F8 94 aa1.29□□□□□ -2.2
PKP4-212ENST00000483881 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
PKP4-212ENST00000483881 RPS29P62273 56 aaKnown RBP1.26□□□□□ -2.21
PKP4-212ENST00000483881 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
PKP4-212ENST00000483881 TNXBP22105 4242 aa1.24□□□□□ -2.21
PKP4-212ENST00000483881 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
PKP4-212ENST00000483881 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
PKP4-212ENST00000483881 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
PKP4-212ENST00000483881 A0A0D9SG42 100 aa1.18□□□□□ -2.22
PKP4-212ENST00000483881 LPAP08519 4548 aa1.16□□□□□ -2.22
PKP4-212ENST00000483881 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
PKP4-212ENST00000483881 MUC17Q685J3 4493 aa1.13□□□□□ -2.23
PKP4-212ENST00000483881 M0QZ58 72 aa1.12□□□□□ -2.23
PKP4-212ENST00000483881 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
PKP4-212ENST00000483881 SPRR2EP22531 72 aa1.1□□□□□ -2.23
PKP4-212ENST00000483881 SPRR2BP35325 72 aa1.1□□□□□ -2.23
PKP4-212ENST00000483881 SPRR2AP35326 72 aa1.1□□□□□ -2.23
PKP4-212ENST00000483881 SPRR2DP22532 72 aa1.08□□□□□ -2.24
PKP4-212ENST00000483881 FLGP20930 4061 aaPredicted RBP1.03□□□□□ -2.24
PKP4-212ENST00000483881 MT1HP80294 61 aa1□□□□□ -2.25
PKP4-212ENST00000483881 MT2AP02795 61 aa0.99□□□□□ -2.25
PKP4-212ENST00000483881 MT1FP04733 61 aa0.99□□□□□ -2.25
PKP4-212ENST00000483881 TNP1P09430 55 aa0.99□□□□□ -2.25
PKP4-212ENST00000483881 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
PKP4-212ENST00000483881 M0R2T5 61 aa0.98□□□□□ -2.25
PKP4-212ENST00000483881 MT1BP07438 61 aa0.96□□□□□ -2.26
PKP4-212ENST00000483881 MT4P47944 62 aa0.96□□□□□ -2.26
PKP4-212ENST00000483881 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
PKP4-212ENST00000483881 MT1XP80297 61 aa0.94□□□□□ -2.26
PKP4-212ENST00000483881 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
PKP4-212ENST00000483881 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
PKP4-212ENST00000483881 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
PKP4-212ENST00000483881 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
PKP4-212ENST00000483881 KRTAP19-7Q3SYF9 63 aa0.84□□□□□ -2.27
PKP4-212ENST00000483881 PRM1P04553 51 aa0.83□□□□□ -2.28
PKP4-212ENST00000483881 MT1EP04732 61 aa0.82□□□□□ -2.28
PKP4-212ENST00000483881 MT1LQ93083 61 aa0.82□□□□□ -2.28
PKP4-212ENST00000483881 SYNE1Q8NF91 8797 aaKnown RBP0.82□□□□□ -2.28
PKP4-212ENST00000483881 MT1GP13640 62 aa0.77□□□□□ -2.29
PKP4-212ENST00000483881 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
PKP4-212ENST00000483881 MT1MQ8N339 61 aa0.76□□□□□ -2.29
PKP4-212ENST00000483881 MT1AP04731 61 aa0.75□□□□□ -2.29
PKP4-212ENST00000483881 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
PKP4-212ENST00000483881 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
PKP4-212ENST00000483881 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
PKP4-212ENST00000483881 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
PKP4-212ENST00000483881 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 203.4 ms