RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
VARS-225ENST00000482996 MT1EP04732 61 aa5.17□□□□□ -1.58
VARS-225ENST00000482996 TNP1P09430 55 aa5.15□□□□□ -1.59
VARS-225ENST00000482996 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
VARS-225ENST00000482996 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
VARS-225ENST00000482996 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
VARS-225ENST00000482996 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
VARS-225ENST00000482996 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
VARS-225ENST00000482996 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
VARS-225ENST00000482996 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
VARS-225ENST00000482996 MT1GP13640 62 aa5.02□□□□□ -1.61
VARS-225ENST00000482996 LCE3AQ5TA76 89 aa5□□□□□ -1.61
VARS-225ENST00000482996 PP632Q6XCG6 107 aa5□□□□□ -1.61
VARS-225ENST00000482996 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
VARS-225ENST00000482996 MT1LQ93083 61 aa4.94□□□□□ -1.62
VARS-225ENST00000482996 MT1MQ8N339 61 aa4.92□□□□□ -1.62
VARS-225ENST00000482996 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
VARS-225ENST00000482996 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
VARS-225ENST00000482996 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
VARS-225ENST00000482996 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
VARS-225ENST00000482996 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
VARS-225ENST00000482996 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
VARS-225ENST00000482996 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
VARS-225ENST00000482996 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
VARS-225ENST00000482996 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
VARS-225ENST00000482996 MT4P47944 62 aa4.7□□□□□ -1.66
VARS-225ENST00000482996 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
VARS-225ENST00000482996 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
VARS-225ENST00000482996 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
VARS-225ENST00000482996 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
VARS-225ENST00000482996 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
VARS-225ENST00000482996 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
VARS-225ENST00000482996 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
VARS-225ENST00000482996 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
VARS-225ENST00000482996 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
VARS-225ENST00000482996 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
VARS-225ENST00000482996 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
VARS-225ENST00000482996 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
VARS-225ENST00000482996 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
VARS-225ENST00000482996 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
VARS-225ENST00000482996 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
VARS-225ENST00000482996 MT1AP04731 61 aa4.21□□□□□ -1.74
VARS-225ENST00000482996 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
VARS-225ENST00000482996 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
VARS-225ENST00000482996 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
VARS-225ENST00000482996 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
VARS-225ENST00000482996 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
VARS-225ENST00000482996 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
VARS-225ENST00000482996 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
VARS-225ENST00000482996 MUC5ACP98088 5654 aa4□□□□□ -1.77
VARS-225ENST00000482996 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
VARS-225ENST00000482996 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
VARS-225ENST00000482996 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
VARS-225ENST00000482996 MT3P25713 68 aa3.87□□□□□ -1.79
VARS-225ENST00000482996 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
VARS-225ENST00000482996 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
VARS-225ENST00000482996 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
VARS-225ENST00000482996 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
VARS-225ENST00000482996 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
VARS-225ENST00000482996 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
VARS-225ENST00000482996 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
VARS-225ENST00000482996 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
VARS-225ENST00000482996 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
VARS-225ENST00000482996 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
VARS-225ENST00000482996 INE1O15225 51 aa3.26□□□□□ -1.89
VARS-225ENST00000482996 H3BS24 57 aa3.2□□□□□ -1.9
VARS-225ENST00000482996 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
VARS-225ENST00000482996 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
VARS-225ENST00000482996 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
VARS-225ENST00000482996 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
VARS-225ENST00000482996 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
VARS-225ENST00000482996 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
VARS-225ENST00000482996 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
VARS-225ENST00000482996 PRM1P04553 51 aa2.7□□□□□ -1.98
VARS-225ENST00000482996 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
VARS-225ENST00000482996 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
VARS-225ENST00000482996 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
VARS-225ENST00000482996 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms