RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
SQSTM1-207ENST00000481335 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
SQSTM1-207ENST00000481335 A8MU10 97 aa4.27□□□□□ -1.73
SQSTM1-207ENST00000481335 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
SQSTM1-207ENST00000481335 PRR15LQ9BU68 103 aa4.26□□□□□ -1.73
SQSTM1-207ENST00000481335 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
SQSTM1-207ENST00000481335 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
SQSTM1-207ENST00000481335 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
SQSTM1-207ENST00000481335 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
SQSTM1-207ENST00000481335 MT4P47944 62 aa4.19□□□□□ -1.74
SQSTM1-207ENST00000481335 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
SQSTM1-207ENST00000481335 LINC01558Q9Y6Z2 57 aa4.15□□□□□ -1.75
SQSTM1-207ENST00000481335 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SQSTM1-207ENST00000481335 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
SQSTM1-207ENST00000481335 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
SQSTM1-207ENST00000481335 UQCR11O14957 56 aa4.1□□□□□ -1.75
SQSTM1-207ENST00000481335 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
SQSTM1-207ENST00000481335 TMEM258P61165 79 aa4.04□□□□□ -1.76
SQSTM1-207ENST00000481335 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
SQSTM1-207ENST00000481335 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
SQSTM1-207ENST00000481335 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
SQSTM1-207ENST00000481335 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
SQSTM1-207ENST00000481335 V9GYY9 64 aa4□□□□□ -1.77
SQSTM1-207ENST00000481335 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SQSTM1-207ENST00000481335 K7ERS5 55 aa3.96□□□□□ -1.78
SQSTM1-207ENST00000481335 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
SQSTM1-207ENST00000481335 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
SQSTM1-207ENST00000481335 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
SQSTM1-207ENST00000481335 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SQSTM1-207ENST00000481335 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
SQSTM1-207ENST00000481335 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
SQSTM1-207ENST00000481335 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
SQSTM1-207ENST00000481335 Q1T7F1 81 aa3.81□□□□□ -1.8
SQSTM1-207ENST00000481335 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
SQSTM1-207ENST00000481335 PSPHP1O15172 72 aa3.78□□□□□ -1.8
SQSTM1-207ENST00000481335 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
SQSTM1-207ENST00000481335 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SQSTM1-207ENST00000481335 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
SQSTM1-207ENST00000481335 A6NED7 52 aa3.68□□□□□ -1.82
SQSTM1-207ENST00000481335 MT1AP04731 61 aa3.68□□□□□ -1.82
SQSTM1-207ENST00000481335 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
SQSTM1-207ENST00000481335 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
SQSTM1-207ENST00000481335 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
SQSTM1-207ENST00000481335 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
SQSTM1-207ENST00000481335 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SQSTM1-207ENST00000481335 ROMO1P60602 79 aa3.62□□□□□ -1.83
SQSTM1-207ENST00000481335 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
SQSTM1-207ENST00000481335 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
SQSTM1-207ENST00000481335 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
SQSTM1-207ENST00000481335 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
SQSTM1-207ENST00000481335 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SQSTM1-207ENST00000481335 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SQSTM1-207ENST00000481335 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
SQSTM1-207ENST00000481335 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
SQSTM1-207ENST00000481335 MT3P25713 68 aa3.38□□□□□ -1.87
SQSTM1-207ENST00000481335 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SQSTM1-207ENST00000481335 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
SQSTM1-207ENST00000481335 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
SQSTM1-207ENST00000481335 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
SQSTM1-207ENST00000481335 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SQSTM1-207ENST00000481335 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SQSTM1-207ENST00000481335 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
SQSTM1-207ENST00000481335 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
SQSTM1-207ENST00000481335 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SQSTM1-207ENST00000481335 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SQSTM1-207ENST00000481335 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SQSTM1-207ENST00000481335 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SQSTM1-207ENST00000481335 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SQSTM1-207ENST00000481335 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SQSTM1-207ENST00000481335 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SQSTM1-207ENST00000481335 PHGR1C9JFL3 82 aa2.53□□□□□ -2
SQSTM1-207ENST00000481335 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SQSTM1-207ENST00000481335 INE1O15225 51 aa2.31□□□□□ -2.04
SQSTM1-207ENST00000481335 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SQSTM1-207ENST00000481335 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SQSTM1-207ENST00000481335 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SQSTM1-207ENST00000481335 PRM1P04553 51 aa1.81□□□□□ -2.12
SQSTM1-207ENST00000481335 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms