RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
PRPF4B-206ENST00000481109 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
PRPF4B-206ENST00000481109 USH2AO75445 5202 aa3.44□□□□□ -1.86
PRPF4B-206ENST00000481109 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
PRPF4B-206ENST00000481109 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
PRPF4B-206ENST00000481109 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
PRPF4B-206ENST00000481109 KMT2DO14686 5537 aa3.4□□□□□ -1.86
PRPF4B-206ENST00000481109 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
PRPF4B-206ENST00000481109 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
PRPF4B-206ENST00000481109 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
PRPF4B-206ENST00000481109 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
PRPF4B-206ENST00000481109 PRM1P04553 51 aa3.2□□□□□ -1.9
PRPF4B-206ENST00000481109 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
PRPF4B-206ENST00000481109 KRTAP4-7Q9BYR0 210 aa3.17□□□□□ -1.9
PRPF4B-206ENST00000481109 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
PRPF4B-206ENST00000481109 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
PRPF4B-206ENST00000481109 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
PRPF4B-206ENST00000481109 MT1EP04732 61 aa3.11□□□□□ -1.91
PRPF4B-206ENST00000481109 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
PRPF4B-206ENST00000481109 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
PRPF4B-206ENST00000481109 MT1AP04731 61 aa3.1□□□□□ -1.91
PRPF4B-206ENST00000481109 MT1LQ93083 61 aa3.09□□□□□ -1.92
PRPF4B-206ENST00000481109 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
PRPF4B-206ENST00000481109 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
PRPF4B-206ENST00000481109 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
PRPF4B-206ENST00000481109 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
PRPF4B-206ENST00000481109 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
PRPF4B-206ENST00000481109 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
PRPF4B-206ENST00000481109 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
PRPF4B-206ENST00000481109 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
PRPF4B-206ENST00000481109 KRTAP19-6Q3LI70 58 aa2.9□□□□□ -1.95
PRPF4B-206ENST00000481109 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
PRPF4B-206ENST00000481109 MT1GP13640 62 aa2.87□□□□□ -1.95
PRPF4B-206ENST00000481109 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
PRPF4B-206ENST00000481109 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
PRPF4B-206ENST00000481109 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
PRPF4B-206ENST00000481109 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
PRPF4B-206ENST00000481109 NEBP20929 6669 aa2.84□□□□□ -1.96
PRPF4B-206ENST00000481109 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
PRPF4B-206ENST00000481109 MT1MQ8N339 61 aa2.8□□□□□ -1.96
PRPF4B-206ENST00000481109 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
PRPF4B-206ENST00000481109 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
PRPF4B-206ENST00000481109 MT3P25713 68 aa2.76□□□□□ -1.97
PRPF4B-206ENST00000481109 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
PRPF4B-206ENST00000481109 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
PRPF4B-206ENST00000481109 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
PRPF4B-206ENST00000481109 SPRR2AP35326 72 aa2.66□□□□□ -1.98
PRPF4B-206ENST00000481109 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
PRPF4B-206ENST00000481109 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
PRPF4B-206ENST00000481109 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
PRPF4B-206ENST00000481109 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
PRPF4B-206ENST00000481109 SPRR2BP35325 72 aa2.58□□□□□ -2
PRPF4B-206ENST00000481109 SPRR2DP22532 72 aa2.56□□□□□ -2
PRPF4B-206ENST00000481109 SPRR2EP22531 72 aa2.56□□□□□ -2
PRPF4B-206ENST00000481109 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
PRPF4B-206ENST00000481109 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PRPF4B-206ENST00000481109 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.05
PRPF4B-206ENST00000481109 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
PRPF4B-206ENST00000481109 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
PRPF4B-206ENST00000481109 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
PRPF4B-206ENST00000481109 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
PRPF4B-206ENST00000481109 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
PRPF4B-206ENST00000481109 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
PRPF4B-206ENST00000481109 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PRPF4B-206ENST00000481109 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
PRPF4B-206ENST00000481109 MT4P47944 62 aa2.11□□□□□ -2.07
PRPF4B-206ENST00000481109 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
PRPF4B-206ENST00000481109 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
PRPF4B-206ENST00000481109 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
PRPF4B-206ENST00000481109 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
PRPF4B-206ENST00000481109 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
PRPF4B-206ENST00000481109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
PRPF4B-206ENST00000481109 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
PRPF4B-206ENST00000481109 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
PRPF4B-206ENST00000481109 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
PRPF4B-206ENST00000481109 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.16
PRPF4B-206ENST00000481109 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
PRPF4B-206ENST00000481109 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 15 ms