RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ROMO1P60602 79 aa7.45□□□□□ -1.22
VPS36-204ENST00000480923 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
VPS36-204ENST00000480923 KRTAP19-3Q7Z4W3 81 aa7.41□□□□□ -1.22
VPS36-204ENST00000480923 LCE5AQ5TCM9 118 aa7.4□□□□□ -1.22
VPS36-204ENST00000480923 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
VPS36-204ENST00000480923 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
VPS36-204ENST00000480923 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
VPS36-204ENST00000480923 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
VPS36-204ENST00000480923 MT1GP13640 62 aa7.25□□□□□ -1.25
VPS36-204ENST00000480923 DSTQ03001 7570 aaKnown RBP7.22□□□□□ -1.25
VPS36-204ENST00000480923 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
VPS36-204ENST00000480923 MT1LQ93083 61 aa7.19□□□□□ -1.26
VPS36-204ENST00000480923 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
VPS36-204ENST00000480923 MT1MQ8N339 61 aa7.13□□□□□ -1.27
VPS36-204ENST00000480923 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
VPS36-204ENST00000480923 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
VPS36-204ENST00000480923 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
VPS36-204ENST00000480923 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
VPS36-204ENST00000480923 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
VPS36-204ENST00000480923 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
VPS36-204ENST00000480923 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
VPS36-204ENST00000480923 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
VPS36-204ENST00000480923 MT4P47944 62 aa6.78□□□□□ -1.32
VPS36-204ENST00000480923 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
VPS36-204ENST00000480923 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
VPS36-204ENST00000480923 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
VPS36-204ENST00000480923 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
VPS36-204ENST00000480923 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
VPS36-204ENST00000480923 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
VPS36-204ENST00000480923 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
VPS36-204ENST00000480923 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
VPS36-204ENST00000480923 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
VPS36-204ENST00000480923 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
VPS36-204ENST00000480923 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
VPS36-204ENST00000480923 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
VPS36-204ENST00000480923 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
VPS36-204ENST00000480923 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
VPS36-204ENST00000480923 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
VPS36-204ENST00000480923 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
VPS36-204ENST00000480923 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
VPS36-204ENST00000480923 MT1AP04731 61 aa6.11□□□□□ -1.43
VPS36-204ENST00000480923 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
VPS36-204ENST00000480923 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
VPS36-204ENST00000480923 KRTAP5-7Q6L8G8 165 aa6□□□□□ -1.45
VPS36-204ENST00000480923 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
VPS36-204ENST00000480923 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
VPS36-204ENST00000480923 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
VPS36-204ENST00000480923 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
VPS36-204ENST00000480923 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
VPS36-204ENST00000480923 MT3P25713 68 aa5.6□□□□□ -1.51
VPS36-204ENST00000480923 KRTAP5-8O75690 187 aa5.56□□□□□ -1.52
VPS36-204ENST00000480923 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
VPS36-204ENST00000480923 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
VPS36-204ENST00000480923 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
VPS36-204ENST00000480923 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
VPS36-204ENST00000480923 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
VPS36-204ENST00000480923 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
VPS36-204ENST00000480923 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
VPS36-204ENST00000480923 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
VPS36-204ENST00000480923 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
VPS36-204ENST00000480923 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
VPS36-204ENST00000480923 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
VPS36-204ENST00000480923 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
VPS36-204ENST00000480923 H3BS24 57 aa4.67□□□□□ -1.66
VPS36-204ENST00000480923 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
VPS36-204ENST00000480923 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
VPS36-204ENST00000480923 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
VPS36-204ENST00000480923 INE1O15225 51 aa4.36□□□□□ -1.71
VPS36-204ENST00000480923 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
VPS36-204ENST00000480923 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
VPS36-204ENST00000480923 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
VPS36-204ENST00000480923 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
VPS36-204ENST00000480923 PRM1P04553 51 aa3.83□□□□□ -1.8
VPS36-204ENST00000480923 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
VPS36-204ENST00000480923 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
VPS36-204ENST00000480923 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
VPS36-204ENST00000480923 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
VPS36-204ENST00000480923 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 109.9 ms