RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
ABCF3-213ENST00000480539 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
ABCF3-213ENST00000480539 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
ABCF3-213ENST00000480539 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
ABCF3-213ENST00000480539 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
ABCF3-213ENST00000480539 MT1LQ93083 61 aa5.42□□□□□ -1.54
ABCF3-213ENST00000480539 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
ABCF3-213ENST00000480539 ROMO1P60602 79 aa5.4□□□□□ -1.54
ABCF3-213ENST00000480539 MT1GP13640 62 aa5.36□□□□□ -1.55
ABCF3-213ENST00000480539 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
ABCF3-213ENST00000480539 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
ABCF3-213ENST00000480539 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
ABCF3-213ENST00000480539 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
ABCF3-213ENST00000480539 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
ABCF3-213ENST00000480539 MT1MQ8N339 61 aa5.33□□□□□ -1.56
ABCF3-213ENST00000480539 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
ABCF3-213ENST00000480539 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
ABCF3-213ENST00000480539 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
ABCF3-213ENST00000480539 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
ABCF3-213ENST00000480539 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
ABCF3-213ENST00000480539 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
ABCF3-213ENST00000480539 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
ABCF3-213ENST00000480539 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
ABCF3-213ENST00000480539 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
ABCF3-213ENST00000480539 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
ABCF3-213ENST00000480539 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
ABCF3-213ENST00000480539 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
ABCF3-213ENST00000480539 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
ABCF3-213ENST00000480539 MT4P47944 62 aa4.89□□□□□ -1.63
ABCF3-213ENST00000480539 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
ABCF3-213ENST00000480539 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
ABCF3-213ENST00000480539 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
ABCF3-213ENST00000480539 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
ABCF3-213ENST00000480539 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
ABCF3-213ENST00000480539 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
ABCF3-213ENST00000480539 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
ABCF3-213ENST00000480539 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.66
ABCF3-213ENST00000480539 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
ABCF3-213ENST00000480539 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
ABCF3-213ENST00000480539 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
ABCF3-213ENST00000480539 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
ABCF3-213ENST00000480539 MT1AP04731 61 aa4.6□□□□□ -1.67
ABCF3-213ENST00000480539 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
ABCF3-213ENST00000480539 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
ABCF3-213ENST00000480539 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
ABCF3-213ENST00000480539 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
ABCF3-213ENST00000480539 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
ABCF3-213ENST00000480539 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
ABCF3-213ENST00000480539 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
ABCF3-213ENST00000480539 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
ABCF3-213ENST00000480539 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
ABCF3-213ENST00000480539 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
ABCF3-213ENST00000480539 MT3P25713 68 aa4.19□□□□□ -1.74
ABCF3-213ENST00000480539 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
ABCF3-213ENST00000480539 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
ABCF3-213ENST00000480539 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
ABCF3-213ENST00000480539 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
ABCF3-213ENST00000480539 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
ABCF3-213ENST00000480539 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
ABCF3-213ENST00000480539 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
ABCF3-213ENST00000480539 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
ABCF3-213ENST00000480539 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
ABCF3-213ENST00000480539 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
ABCF3-213ENST00000480539 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
ABCF3-213ENST00000480539 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
ABCF3-213ENST00000480539 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
ABCF3-213ENST00000480539 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
ABCF3-213ENST00000480539 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
ABCF3-213ENST00000480539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
ABCF3-213ENST00000480539 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
ABCF3-213ENST00000480539 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
ABCF3-213ENST00000480539 PRM1P04553 51 aa2.8□□□□□ -1.96
ABCF3-213ENST00000480539 INE1O15225 51 aa2.74□□□□□ -1.97
ABCF3-213ENST00000480539 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
ABCF3-213ENST00000480539 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
ABCF3-213ENST00000480539 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
ABCF3-213ENST00000480539 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
ABCF3-213ENST00000480539 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 101.1 ms