RNA–Protein interactions for RNA: ENST00000480475.5

SUN1-231, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-231	ENST00000480475	HMCN1	Q96RW7	5635 aa		5.93	□□□□□ -1.46
SUN1-231	ENST00000480475	PRR15L	Q9BU68	103 aa		5.9	□□□□□ -1.46
SUN1-231	ENST00000480475	LINC01558	Q9Y6Z2	57 aa		5.89	□□□□□ -1.47
SUN1-231	ENST00000480475	ATP5E	P56381	51 aa	Predicted RBP	5.88	□□□□□ -1.47
SUN1-231	ENST00000480475	TMEM258	P61165	79 aa		5.84	□□□□□ -1.47
SUN1-231	ENST00000480475	KRTAP5-4	Q6L8H1	288 aa		5.84	□□□□□ -1.47
SUN1-231	ENST00000480475	KRTAP4-7	Q9BYR0	210 aa		5.84	□□□□□ -1.47
SUN1-231	ENST00000480475	KRTAP12-3	P60328	96 aa		5.8	□□□□□ -1.48
SUN1-231	ENST00000480475	PCP4	P48539	62 aa		5.78	□□□□□ -1.48
SUN1-231	ENST00000480475	KRTAP4-6	Q9BYQ5	205 aa		5.78	□□□□□ -1.48
SUN1-231	ENST00000480475	AHNAK2	Q8IVF2	5795 aa		5.75	□□□□□ -1.49
SUN1-231	ENST00000480475	UQCR11	O14957	56 aa		5.73	□□□□□ -1.49
SUN1-231	ENST00000480475	KRTAP5-10	Q6L8G5	202 aa		5.62	□□□□□ -1.51
SUN1-231	ENST00000480475	MIR22HG	Q0VDD5	57 aa		5.61	□□□□□ -1.51
SUN1-231	ENST00000480475	KRTAP25-1	Q3LHN0	102 aa		5.6	□□□□□ -1.51
SUN1-231	ENST00000480475	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.59	□□□□□ -1.51
SUN1-231	ENST00000480475	LOC100996750	A0A140TA64	210 aa		5.53	□□□□□ -1.52
SUN1-231	ENST00000480475	KRTAP20-2	Q3LI61	65 aa		5.52	□□□□□ -1.53
SUN1-231	ENST00000480475	PSPHP1	O15172	72 aa		5.49	□□□□□ -1.53
SUN1-231	ENST00000480475	RPS28	P62857	69 aa	Known RBP	5.48	□□□□□ -1.53
SUN1-231	ENST00000480475		V9GYY9	64 aa		5.48	□□□□□ -1.53
SUN1-231	ENST00000480475	KRTAP5-3	Q6L8H2	238 aa		5.47	□□□□□ -1.53
SUN1-231	ENST00000480475		K7ERS5	55 aa		5.46	□□□□□ -1.54
SUN1-231	ENST00000480475	SPRR5	A0A1B0GTR4	108 aa		5.45	□□□□□ -1.54
SUN1-231	ENST00000480475		Q1T7F1	81 aa		5.43	□□□□□ -1.54
SUN1-231	ENST00000480475	SYNE1	Q8NF91	8797 aa	Known RBP	5.42	□□□□□ -1.54
SUN1-231	ENST00000480475	KRTAP12-4	P60329	112 aa		5.41	□□□□□ -1.54
SUN1-231	ENST00000480475	KRTAP5-7	Q6L8G8	165 aa		5.39	□□□□□ -1.55
SUN1-231	ENST00000480475	KRTAP15-1	Q3LI76	137 aa		5.38	□□□□□ -1.55
SUN1-231	ENST00000480475	KRTAP19-4	Q3LI73	84 aa		5.37	□□□□□ -1.55
SUN1-231	ENST00000480475	KRTAP23-1	A1A580	65 aa		5.36	□□□□□ -1.55
SUN1-231	ENST00000480475	LCE3C	Q5T5A8	94 aa		5.34	□□□□□ -1.55
SUN1-231	ENST00000480475		A6NED7	52 aa		5.25	□□□□□ -1.57
SUN1-231	ENST00000480475	CDC42SE1	Q9NRR8	79 aa		5.19	□□□□□ -1.58
SUN1-231	ENST00000480475	KRTAP6-1	Q3LI64	71 aa		5.17	□□□□□ -1.58
SUN1-231	ENST00000480475	MT1A	P04731	61 aa		5.15	□□□□□ -1.59
SUN1-231	ENST00000480475	ROMO1	P60602	79 aa		5.13	□□□□□ -1.59
SUN1-231	ENST00000480475	KRTAP9-6	A8MVA2	160 aa		5.11	□□□□□ -1.59
SUN1-231	ENST00000480475	KRTAP5-2	Q701N4	177 aa		5.11	□□□□□ -1.59
SUN1-231	ENST00000480475	KRTAP4-11	Q9BYQ6	195 aa		5.06	□□□□□ -1.6
SUN1-231	ENST00000480475	KRTAP9-4	Q9BYQ2	154 aa		5.01	□□□□□ -1.61
SUN1-231	ENST00000480475	KRTAP6-2	Q3LI66	62 aa		4.95	□□□□□ -1.62
SUN1-231	ENST00000480475	KRTAP5-8	O75690	187 aa		4.91	□□□□□ -1.62
SUN1-231	ENST00000480475	BRK1	Q8WUW1	75 aa		4.87	□□□□□ -1.63
SUN1-231	ENST00000480475	OBSCN	Q5VST9	7968 aa		4.79	□□□□□ -1.64
SUN1-231	ENST00000480475	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.74	□□□□□ -1.65
SUN1-231	ENST00000480475	KRTAP4-12	Q9BQ66	201 aa		4.74	□□□□□ -1.65
SUN1-231	ENST00000480475	AHNAK	Q09666	5890 aa	Known RBP	4.72	□□□□□ -1.65
SUN1-231	ENST00000480475	MT3	P25713	68 aa		4.7	□□□□□ -1.66
SUN1-231	ENST00000480475	MUC5AC	P98088	5654 aa		4.69	□□□□□ -1.66
SUN1-231	ENST00000480475	KRTAP9-9	Q9BYP9	154 aa		4.63	□□□□□ -1.67
SUN1-231	ENST00000480475	PMAIP1	Q13794	54 aa		4.62	□□□□□ -1.67
SUN1-231	ENST00000480475	KRTAP5-1	Q6L8H4	278 aa		4.61	□□□□□ -1.67
SUN1-231	ENST00000480475	PRO0628	Q9UI54	55 aa		4.59	□□□□□ -1.67
SUN1-231	ENST00000480475	SVIP	Q8NHG7	77 aa		4.46	□□□□□ -1.7
SUN1-231	ENST00000480475	LCE1E	Q5T753	118 aa		4.33	□□□□□ -1.72
SUN1-231	ENST00000480475	PRAC1	Q96KF2	57 aa		4.32	□□□□□ -1.72
SUN1-231	ENST00000480475		H3BS24	57 aa		4.3	□□□□□ -1.72
SUN1-231	ENST00000480475	KTN1-AS1	Q86SY8	53 aa		4.3	□□□□□ -1.72
SUN1-231	ENST00000480475	KRTAP4-2	Q9BYR5	136 aa		4.25	□□□□□ -1.73
SUN1-231	ENST00000480475	LCE1B	Q5T7P3	118 aa		4.13	□□□□□ -1.75
SUN1-231	ENST00000480475	LCE1C	Q5T751	118 aa		4.03	□□□□□ -1.76
SUN1-231	ENST00000480475	LCE3D	Q9BYE3	92 aa		3.81	□□□□□ -1.8
SUN1-231	ENST00000480475	KRTAP5-11	Q6L8G4	156 aa		3.66	□□□□□ -1.82
SUN1-231	ENST00000480475	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.66	□□□□□ -1.82
SUN1-231	ENST00000480475	LUZP6	Q538Z0	58 aa		3.65	□□□□□ -1.83
SUN1-231	ENST00000480475	LCE3E	Q5T5B0	92 aa		3.57	□□□□□ -1.84
SUN1-231	ENST00000480475	LCE1F	Q5T754	118 aa		3.55	□□□□□ -1.84
SUN1-231	ENST00000480475		A0A0A0MQY5	61 aa		3.52	□□□□□ -1.85
SUN1-231	ENST00000480475	KRTAP21-2	Q3LI59	83 aa		3.41	□□□□□ -1.86
SUN1-231	ENST00000480475	NDUFAF8	A1L188	74 aa		3.26	□□□□□ -1.89
SUN1-231	ENST00000480475	PHGR1	C9JFL3	82 aa		3.26	□□□□□ -1.89
SUN1-231	ENST00000480475	KRTAP4-4	Q9BYR3	166 aa		3.17	□□□□□ -1.9
SUN1-231	ENST00000480475	MUC19	Q7Z5P9	8384 aa		2.97	□□□□□ -1.93
SUN1-231	ENST00000480475	INE1	O15225	51 aa		2.72	□□□□□ -1.97
SUN1-231	ENST00000480475	PRM1	P04553	51 aa		2.65	□□□□□ -1.99
SUN1-231	ENST00000480475	KRTAP21-1	Q3LI58	79 aa		2.45	□□□□□ -2.02
SUN1-231	ENST00000480475	MUC16	Q8WXI7	14507 aa		2.09	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms