RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
PKP4-210ENST00000480171 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
PKP4-210ENST00000480171 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
PKP4-210ENST00000480171 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
PKP4-210ENST00000480171 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
PKP4-210ENST00000480171 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
PKP4-210ENST00000480171 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
PKP4-210ENST00000480171 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
PKP4-210ENST00000480171 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
PKP4-210ENST00000480171 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
PKP4-210ENST00000480171 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
PKP4-210ENST00000480171 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
PKP4-210ENST00000480171 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
PKP4-210ENST00000480171 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
PKP4-210ENST00000480171 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
PKP4-210ENST00000480171 MT1LQ93083 61 aa2.98□□□□□ -1.93
PKP4-210ENST00000480171 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
PKP4-210ENST00000480171 MT1EP04732 61 aa2.98□□□□□ -1.93
PKP4-210ENST00000480171 KRTAP6-3Q3LI67 103 aa2.97□□□□□ -1.93
PKP4-210ENST00000480171 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
PKP4-210ENST00000480171 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
PKP4-210ENST00000480171 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
PKP4-210ENST00000480171 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
PKP4-210ENST00000480171 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
PKP4-210ENST00000480171 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
PKP4-210ENST00000480171 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
PKP4-210ENST00000480171 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.95
PKP4-210ENST00000480171 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
PKP4-210ENST00000480171 MT1GP13640 62 aa2.79□□□□□ -1.96
PKP4-210ENST00000480171 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
PKP4-210ENST00000480171 MT1MQ8N339 61 aa2.78□□□□□ -1.96
PKP4-210ENST00000480171 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
PKP4-210ENST00000480171 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
PKP4-210ENST00000480171 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
PKP4-210ENST00000480171 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
PKP4-210ENST00000480171 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
PKP4-210ENST00000480171 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
PKP4-210ENST00000480171 MT3P25713 68 aa2.65□□□□□ -1.99
PKP4-210ENST00000480171 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
PKP4-210ENST00000480171 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
PKP4-210ENST00000480171 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PKP4-210ENST00000480171 MT1AP04731 61 aa2.57□□□□□ -2
PKP4-210ENST00000480171 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
PKP4-210ENST00000480171 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
PKP4-210ENST00000480171 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
PKP4-210ENST00000480171 SPRR2EP22531 72 aa2.49□□□□□ -2.01
PKP4-210ENST00000480171 SPRR2BP35325 72 aa2.49□□□□□ -2.01
PKP4-210ENST00000480171 SPRR2AP35326 72 aa2.49□□□□□ -2.01
PKP4-210ENST00000480171 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
PKP4-210ENST00000480171 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
PKP4-210ENST00000480171 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
PKP4-210ENST00000480171 NEBP20929 6669 aa2.42□□□□□ -2.02
PKP4-210ENST00000480171 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
PKP4-210ENST00000480171 SPRR2DP22532 72 aa2.37□□□□□ -2.03
PKP4-210ENST00000480171 PRM1P04553 51 aa2.36□□□□□ -2.03
PKP4-210ENST00000480171 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
PKP4-210ENST00000480171 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
PKP4-210ENST00000480171 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
PKP4-210ENST00000480171 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
PKP4-210ENST00000480171 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
PKP4-210ENST00000480171 MT4P47944 62 aa2.21□□□□□ -2.06
PKP4-210ENST00000480171 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
PKP4-210ENST00000480171 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
PKP4-210ENST00000480171 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
PKP4-210ENST00000480171 LCE1CQ5T751 118 aa2□□□□□ -2.09
PKP4-210ENST00000480171 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
PKP4-210ENST00000480171 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
PKP4-210ENST00000480171 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
PKP4-210ENST00000480171 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
PKP4-210ENST00000480171 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
PKP4-210ENST00000480171 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
PKP4-210ENST00000480171 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
PKP4-210ENST00000480171 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PKP4-210ENST00000480171 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
PKP4-210ENST00000480171 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
PKP4-210ENST00000480171 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PKP4-210ENST00000480171 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
PKP4-210ENST00000480171 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms