RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
ATG4B-219ENST00000479941 MT1GP13640 62 aa3.88□□□□□ -1.79
ATG4B-219ENST00000479941 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
ATG4B-219ENST00000479941 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
ATG4B-219ENST00000479941 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
ATG4B-219ENST00000479941 ROMO1P60602 79 aa3.87□□□□□ -1.79
ATG4B-219ENST00000479941 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
ATG4B-219ENST00000479941 MT1LQ93083 61 aa3.87□□□□□ -1.79
ATG4B-219ENST00000479941 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
ATG4B-219ENST00000479941 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
ATG4B-219ENST00000479941 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
ATG4B-219ENST00000479941 MT1MQ8N339 61 aa3.81□□□□□ -1.8
ATG4B-219ENST00000479941 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
ATG4B-219ENST00000479941 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
ATG4B-219ENST00000479941 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
ATG4B-219ENST00000479941 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
ATG4B-219ENST00000479941 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
ATG4B-219ENST00000479941 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
ATG4B-219ENST00000479941 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
ATG4B-219ENST00000479941 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
ATG4B-219ENST00000479941 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
ATG4B-219ENST00000479941 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
ATG4B-219ENST00000479941 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
ATG4B-219ENST00000479941 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ATG4B-219ENST00000479941 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
ATG4B-219ENST00000479941 MT4P47944 62 aa3.47□□□□□ -1.85
ATG4B-219ENST00000479941 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
ATG4B-219ENST00000479941 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
ATG4B-219ENST00000479941 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
ATG4B-219ENST00000479941 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
ATG4B-219ENST00000479941 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
ATG4B-219ENST00000479941 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
ATG4B-219ENST00000479941 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
ATG4B-219ENST00000479941 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
ATG4B-219ENST00000479941 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
ATG4B-219ENST00000479941 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
ATG4B-219ENST00000479941 MT1AP04731 61 aa3.3□□□□□ -1.88
ATG4B-219ENST00000479941 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
ATG4B-219ENST00000479941 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
ATG4B-219ENST00000479941 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
ATG4B-219ENST00000479941 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
ATG4B-219ENST00000479941 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
ATG4B-219ENST00000479941 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
ATG4B-219ENST00000479941 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
ATG4B-219ENST00000479941 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
ATG4B-219ENST00000479941 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
ATG4B-219ENST00000479941 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
ATG4B-219ENST00000479941 MT3P25713 68 aa3.02□□□□□ -1.93
ATG4B-219ENST00000479941 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
ATG4B-219ENST00000479941 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
ATG4B-219ENST00000479941 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
ATG4B-219ENST00000479941 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
ATG4B-219ENST00000479941 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
ATG4B-219ENST00000479941 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
ATG4B-219ENST00000479941 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
ATG4B-219ENST00000479941 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
ATG4B-219ENST00000479941 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
ATG4B-219ENST00000479941 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
ATG4B-219ENST00000479941 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
ATG4B-219ENST00000479941 LCE1CQ5T751 118 aa2.54□□□□□ -2
ATG4B-219ENST00000479941 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
ATG4B-219ENST00000479941 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
ATG4B-219ENST00000479941 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
ATG4B-219ENST00000479941 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
ATG4B-219ENST00000479941 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
ATG4B-219ENST00000479941 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
ATG4B-219ENST00000479941 KRTAP4-12Q9BQ66 201 aa2.21□□□□□ -2.06
ATG4B-219ENST00000479941 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
ATG4B-219ENST00000479941 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
ATG4B-219ENST00000479941 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
ATG4B-219ENST00000479941 INE1O15225 51 aa2□□□□□ -2.09
ATG4B-219ENST00000479941 PRM1P04553 51 aa1.97□□□□□ -2.09
ATG4B-219ENST00000479941 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
ATG4B-219ENST00000479941 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
ATG4B-219ENST00000479941 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
ATG4B-219ENST00000479941 H3BS24 57 aa1.53□□□□□ -2.16
ATG4B-219ENST00000479941 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
ATG4B-219ENST00000479941 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms