RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	KRTAP5-10	Q6L8G5	202 aa		6.05	□□□□□ -1.44
HDLBP-238	ENST00000479894	AHNAK2	Q8IVF2	5795 aa		6.02	□□□□□ -1.45
HDLBP-238	ENST00000479894	TNP1	P09430	55 aa		6	□□□□□ -1.45
HDLBP-238	ENST00000479894	LCE5A	Q5TCM9	118 aa		5.99	□□□□□ -1.45
HDLBP-238	ENST00000479894	LCE4A	Q5TA78	99 aa		5.96	□□□□□ -1.46
HDLBP-238	ENST00000479894	C10orf95	Q9H7T3	257 aa		5.96	□□□□□ -1.46
HDLBP-238	ENST00000479894	KRTAP5-7	Q6L8G8	165 aa		5.93	□□□□□ -1.46
HDLBP-238	ENST00000479894	MT4	P47944	62 aa		5.92	□□□□□ -1.46
HDLBP-238	ENST00000479894	KRTAP25-1	Q3LHN0	102 aa		5.89	□□□□□ -1.47
HDLBP-238	ENST00000479894	KRTAP19-3	Q7Z4W3	81 aa		5.88	□□□□□ -1.47
HDLBP-238	ENST00000479894	BRK1	Q8WUW1	75 aa		5.84	□□□□□ -1.47
HDLBP-238	ENST00000479894	ROMO1	P60602	79 aa		5.81	□□□□□ -1.48
HDLBP-238	ENST00000479894	KRTAP19-7	Q3SYF9	63 aa		5.78	□□□□□ -1.48
HDLBP-238	ENST00000479894	MT1E	P04732	61 aa		5.75	□□□□□ -1.49
HDLBP-238	ENST00000479894	KRTAP5-3	Q6L8H2	238 aa		5.74	□□□□□ -1.49
HDLBP-238	ENST00000479894	KRTAP23-1	A1A580	65 aa		5.72	□□□□□ -1.49
HDLBP-238	ENST00000479894	KRTAP5-4	Q6L8H1	288 aa		5.72	□□□□□ -1.49
HDLBP-238	ENST00000479894	KRTAP4-6	Q9BYQ5	205 aa		5.69	□□□□□ -1.5
HDLBP-238	ENST00000479894	LCE3A	Q5TA76	89 aa		5.68	□□□□□ -1.5
HDLBP-238	ENST00000479894	SPRR5	A0A1B0GTR4	108 aa		5.66	□□□□□ -1.5
HDLBP-238	ENST00000479894	MT1G	P13640	62 aa		5.66	□□□□□ -1.5
HDLBP-238	ENST00000479894	PP632	Q6XCG6	107 aa		5.64	□□□□□ -1.51
HDLBP-238	ENST00000479894	KRTAP19-5	Q3LI72	72 aa		5.61	□□□□□ -1.51
HDLBP-238	ENST00000479894	PMAIP1	Q13794	54 aa		5.56	□□□□□ -1.52
HDLBP-238	ENST00000479894	KRTAP12-3	P60328	96 aa		5.54	□□□□□ -1.52
HDLBP-238	ENST00000479894	MT1M	Q8N339	61 aa		5.53	□□□□□ -1.52
HDLBP-238	ENST00000479894	PRO0628	Q9UI54	55 aa		5.53	□□□□□ -1.52
HDLBP-238	ENST00000479894	KRTAP19-4	Q3LI73	84 aa		5.44	□□□□□ -1.54
HDLBP-238	ENST00000479894	KRTAP20-2	Q3LI61	65 aa		5.42	□□□□□ -1.54
HDLBP-238	ENST00000479894	SVIP	Q8NHG7	77 aa		5.41	□□□□□ -1.54
HDLBP-238	ENST00000479894	MT1L	Q93083	61 aa		5.4	□□□□□ -1.54
HDLBP-238	ENST00000479894	KRTAP4-3	Q9BYR4	195 aa		5.37	□□□□□ -1.55
HDLBP-238	ENST00000479894	KRTAP15-1	Q3LI76	137 aa		5.34	□□□□□ -1.55
HDLBP-238	ENST00000479894	KRTAP12-4	P60329	112 aa		5.2	□□□□□ -1.58
HDLBP-238	ENST00000479894	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.16	□□□□□ -1.58
HDLBP-238	ENST00000479894	KTN1-AS1	Q86SY8	53 aa		5.16	□□□□□ -1.58
HDLBP-238	ENST00000479894	AHNAK	Q09666	5890 aa	Known RBP	5.14	□□□□□ -1.59
HDLBP-238	ENST00000479894	LCE3C	Q5T5A8	94 aa		5.14	□□□□□ -1.59
HDLBP-238	ENST00000479894	KRTAP4-11	Q9BYQ6	195 aa		5.12	□□□□□ -1.59
HDLBP-238	ENST00000479894	KRTAP4-7	Q9BYR0	210 aa		5.12	□□□□□ -1.59
HDLBP-238	ENST00000479894	MUC5AC	P98088	5654 aa		5.1	□□□□□ -1.59
HDLBP-238	ENST00000479894	PRAC1	Q96KF2	57 aa		5.1	□□□□□ -1.59
HDLBP-238	ENST00000479894	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.06	□□□□□ -1.6
HDLBP-238	ENST00000479894	SYNE1	Q8NF91	8797 aa	Known RBP	5	□□□□□ -1.61
HDLBP-238	ENST00000479894	KRTAP5-8	O75690	187 aa		4.99	□□□□□ -1.61
HDLBP-238	ENST00000479894	KRTAP5-2	Q701N4	177 aa		4.88	□□□□□ -1.63
HDLBP-238	ENST00000479894	LOC100996750	A0A140TA64	210 aa		4.85	□□□□□ -1.63
HDLBP-238	ENST00000479894	KRTAP9-9	Q9BYP9	154 aa		4.84	□□□□□ -1.63
HDLBP-238	ENST00000479894	KRTAP9-6	A8MVA2	160 aa		4.7	□□□□□ -1.66
HDLBP-238	ENST00000479894	OBSCN	Q5VST9	7968 aa		4.65	□□□□□ -1.67
HDLBP-238	ENST00000479894	MT1A	P04731	61 aa		4.63	□□□□□ -1.67
HDLBP-238	ENST00000479894	KRTAP6-1	Q3LI64	71 aa		4.57	□□□□□ -1.68
HDLBP-238	ENST00000479894	KRTAP9-4	Q9BYQ2	154 aa		4.55	□□□□□ -1.68
HDLBP-238	ENST00000479894	KRTAP6-2	Q3LI66	62 aa		4.5	□□□□□ -1.69
HDLBP-238	ENST00000479894	KRTAP5-1	Q6L8H4	278 aa		4.5	□□□□□ -1.69
HDLBP-238	ENST00000479894	LUZP6	Q538Z0	58 aa		4.48	□□□□□ -1.69
HDLBP-238	ENST00000479894	MT3	P25713	68 aa		4.28	□□□□□ -1.72
HDLBP-238	ENST00000479894	LCE1E	Q5T753	118 aa		4.08	□□□□□ -1.76
HDLBP-238	ENST00000479894		H3BS24	57 aa		3.97	□□□□□ -1.77
HDLBP-238	ENST00000479894	KRTAP4-2	Q9BYR5	136 aa		3.89	□□□□□ -1.79
HDLBP-238	ENST00000479894	NDUFAF8	A1L188	74 aa		3.88	□□□□□ -1.79
HDLBP-238	ENST00000479894		A0A0A0MQY5	61 aa		3.87	□□□□□ -1.79
HDLBP-238	ENST00000479894	LCE3D	Q9BYE3	92 aa		3.83	□□□□□ -1.8
HDLBP-238	ENST00000479894	LCE1B	Q5T7P3	118 aa		3.82	□□□□□ -1.8
HDLBP-238	ENST00000479894	LCE1C	Q5T751	118 aa		3.79	□□□□□ -1.8
HDLBP-238	ENST00000479894	KRTAP4-12	Q9BQ66	201 aa		3.72	□□□□□ -1.81
HDLBP-238	ENST00000479894	LCE3E	Q5T5B0	92 aa		3.67	□□□□□ -1.82
HDLBP-238	ENST00000479894	KRTAP5-11	Q6L8G4	156 aa		3.63	□□□□□ -1.83
HDLBP-238	ENST00000479894	LCE1F	Q5T754	118 aa		3.58	□□□□□ -1.84
HDLBP-238	ENST00000479894	PHGR1	C9JFL3	82 aa		3.54	□□□□□ -1.84
HDLBP-238	ENST00000479894	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
HDLBP-238	ENST00000479894	INE1	O15225	51 aa		3.33	□□□□□ -1.88
HDLBP-238	ENST00000479894	KRTAP21-2	Q3LI59	83 aa		3.03	□□□□□ -1.92
HDLBP-238	ENST00000479894	PRM1	P04553	51 aa		2.93	□□□□□ -1.94
HDLBP-238	ENST00000479894	MUC19	Q7Z5P9	8384 aa		2.89	□□□□□ -1.95
HDLBP-238	ENST00000479894	KRTAP4-4	Q9BYR3	166 aa		2.84	□□□□□ -1.95
HDLBP-238	ENST00000479894	KRTAP21-1	Q3LI58	79 aa		2.73	□□□□□ -1.97
HDLBP-238	ENST00000479894	MUC16	Q8WXI7	14507 aa		2.03	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 101.8 ms