RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 HERC2O95714 4834 aa1.74□□□□□ -2.13
CMSS1-204ENST00000479555 MYCBP2O75592 4640 aa1.73□□□□□ -2.13
CMSS1-204ENST00000479555 LRP1Q07954 4544 aaKnown RBP1.73□□□□□ -2.13
CMSS1-204ENST00000479555 TNXBP22105 4242 aa1.73□□□□□ -2.13
CMSS1-204ENST00000479555 SMR3BP02814 79 aaPredicted RBP1.72□□□□□ -2.13
CMSS1-204ENST00000479555 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CMSS1-204ENST00000479555 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
CMSS1-204ENST00000479555 PCLOQ9Y6V0 5065 aa1.68□□□□□ -2.14
CMSS1-204ENST00000479555 HERC1Q15751 4861 aa1.67□□□□□ -2.14
CMSS1-204ENST00000479555 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
CMSS1-204ENST00000479555 KRTAP10-4P60372 401 aaPredicted RBP1.65□□□□□ -2.15
CMSS1-204ENST00000479555 LPAP08519 4548 aa1.64□□□□□ -2.15
CMSS1-204ENST00000479555 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
CMSS1-204ENST00000479555 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
CMSS1-204ENST00000479555 HMCN2Q8NDA2 5059 aa1.59□□□□□ -2.15
CMSS1-204ENST00000479555 MT1HL1P0DM35 61 aa1.59□□□□□ -2.15
CMSS1-204ENST00000479555 LRP2P98164 4655 aa1.58□□□□□ -2.16
CMSS1-204ENST00000479555 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
CMSS1-204ENST00000479555 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
CMSS1-204ENST00000479555 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
CMSS1-204ENST00000479555 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
CMSS1-204ENST00000479555 RNF213Q63HN8 5207 aa1.53□□□□□ -2.17
CMSS1-204ENST00000479555 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
CMSS1-204ENST00000479555 MUC2Q02817 5179 aa1.52□□□□□ -2.17
CMSS1-204ENST00000479555 M0R2T5 61 aa1.51□□□□□ -2.17
CMSS1-204ENST00000479555 SPRR2GQ9BYE4 73 aa1.49□□□□□ -2.17
CMSS1-204ENST00000479555 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
CMSS1-204ENST00000479555 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
CMSS1-204ENST00000479555 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
CMSS1-204ENST00000479555 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
CMSS1-204ENST00000479555 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CMSS1-204ENST00000479555 KRTAP19-2Q3LHN2 52 aa1.37□□□□□ -2.19
CMSS1-204ENST00000479555 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
CMSS1-204ENST00000479555 MT1HP80294 61 aa1.35□□□□□ -2.19
CMSS1-204ENST00000479555 MT1XP80297 61 aa1.3□□□□□ -2.2
CMSS1-204ENST00000479555 KRTAP19-5Q3LI72 72 aa1.28□□□□□ -2.2
CMSS1-204ENST00000479555 USH2AO75445 5202 aa1.27□□□□□ -2.21
CMSS1-204ENST00000479555 MT2AP02795 61 aa1.27□□□□□ -2.21
CMSS1-204ENST00000479555 MT1FP04733 61 aa1.27□□□□□ -2.21
CMSS1-204ENST00000479555 MT1EP04732 61 aa1.26□□□□□ -2.21
CMSS1-204ENST00000479555 SSPOA2VEC9 5147 aa1.25□□□□□ -2.21
CMSS1-204ENST00000479555 MT1AP04731 61 aa1.24□□□□□ -2.21
CMSS1-204ENST00000479555 MT1BP07438 61 aa1.23□□□□□ -2.21
CMSS1-204ENST00000479555 MT1LQ93083 61 aa1.23□□□□□ -2.21
CMSS1-204ENST00000479555 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
CMSS1-204ENST00000479555 KMT2DO14686 5537 aa1.18□□□□□ -2.22
CMSS1-204ENST00000479555 PRM1P04553 51 aa1.15□□□□□ -2.23
CMSS1-204ENST00000479555 KRTAP19-6Q3LI70 58 aa1.14□□□□□ -2.23
CMSS1-204ENST00000479555 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
CMSS1-204ENST00000479555 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
CMSS1-204ENST00000479555 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
CMSS1-204ENST00000479555 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
CMSS1-204ENST00000479555 MT1GP13640 62 aa1.11□□□□□ -2.23
CMSS1-204ENST00000479555 SPRR2AP35326 72 aa1.11□□□□□ -2.23
CMSS1-204ENST00000479555 SPRR2FQ96RM1 72 aa1.1□□□□□ -2.23
CMSS1-204ENST00000479555 SPRR2BP35325 72 aa1.08□□□□□ -2.24
CMSS1-204ENST00000479555 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
CMSS1-204ENST00000479555 MT1MQ8N339 61 aa1.06□□□□□ -2.24
CMSS1-204ENST00000479555 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
CMSS1-204ENST00000479555 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
CMSS1-204ENST00000479555 SYNE2Q8WXH0 6885 aaKnown RBP1.05□□□□□ -2.24
CMSS1-204ENST00000479555 SPRR2EP22531 72 aa1.04□□□□□ -2.24
CMSS1-204ENST00000479555 SPRR2DP22532 72 aa1.03□□□□□ -2.24
CMSS1-204ENST00000479555 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
CMSS1-204ENST00000479555 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
CMSS1-204ENST00000479555 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
CMSS1-204ENST00000479555 NEBP20929 6669 aa0.96□□□□□ -2.26
CMSS1-204ENST00000479555 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
CMSS1-204ENST00000479555 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
CMSS1-204ENST00000479555 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
CMSS1-204ENST00000479555 MT4P47944 62 aa0.87□□□□□ -2.27
CMSS1-204ENST00000479555 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
CMSS1-204ENST00000479555 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
CMSS1-204ENST00000479555 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CMSS1-204ENST00000479555 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
CMSS1-204ENST00000479555 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
CMSS1-204ENST00000479555 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
CMSS1-204ENST00000479555 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 2012.7 ms