RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-216ENST00000479525 MT1GP13640 62 aa6.22□□□□□ -1.41
ECHDC1-216ENST00000479525 MT1MQ8N339 61 aa6.2□□□□□ -1.42
ECHDC1-216ENST00000479525 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
ECHDC1-216ENST00000479525 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
ECHDC1-216ENST00000479525 MT1LQ93083 61 aa6.18□□□□□ -1.42
ECHDC1-216ENST00000479525 MT4P47944 62 aa6.16□□□□□ -1.42
ECHDC1-216ENST00000479525 SMIM26A0A096LP01 95 aa6.15□□□□□ -1.43
ECHDC1-216ENST00000479525 TMEM258P61165 79 aa6.15□□□□□ -1.43
ECHDC1-216ENST00000479525 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
ECHDC1-216ENST00000479525 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
ECHDC1-216ENST00000479525 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
ECHDC1-216ENST00000479525 GPR98Q8WXG9 6306 aa6.1□□□□□ -1.43
ECHDC1-216ENST00000479525 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
ECHDC1-216ENST00000479525 TNP1P09430 55 aa6.04□□□□□ -1.44
ECHDC1-216ENST00000479525 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
ECHDC1-216ENST00000479525 PCP4P48539 62 aa6.01□□□□□ -1.45
ECHDC1-216ENST00000479525 UQCR11O14957 56 aa5.93□□□□□ -1.46
ECHDC1-216ENST00000479525 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
ECHDC1-216ENST00000479525 AHNAK2Q8IVF2 5795 aa5.87□□□□□ -1.47
ECHDC1-216ENST00000479525 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
ECHDC1-216ENST00000479525 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
ECHDC1-216ENST00000479525 V9GYY9 64 aa5.8□□□□□ -1.48
ECHDC1-216ENST00000479525 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
ECHDC1-216ENST00000479525 PSPHP1O15172 72 aa5.78□□□□□ -1.48
ECHDC1-216ENST00000479525 Q1T7F1 81 aa5.77□□□□□ -1.49
ECHDC1-216ENST00000479525 K7ERS5 55 aa5.68□□□□□ -1.5
ECHDC1-216ENST00000479525 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
ECHDC1-216ENST00000479525 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-216ENST00000479525 A6NED7 52 aa5.59□□□□□ -1.51
ECHDC1-216ENST00000479525 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
ECHDC1-216ENST00000479525 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-216ENST00000479525 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
ECHDC1-216ENST00000479525 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-216ENST00000479525 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
ECHDC1-216ENST00000479525 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
ECHDC1-216ENST00000479525 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
ECHDC1-216ENST00000479525 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
ECHDC1-216ENST00000479525 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
ECHDC1-216ENST00000479525 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
ECHDC1-216ENST00000479525 ROMO1P60602 79 aa5.31□□□□□ -1.56
ECHDC1-216ENST00000479525 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
ECHDC1-216ENST00000479525 MT1AP04731 61 aa5.22□□□□□ -1.57
ECHDC1-216ENST00000479525 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
ECHDC1-216ENST00000479525 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
ECHDC1-216ENST00000479525 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
ECHDC1-216ENST00000479525 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
ECHDC1-216ENST00000479525 SVIPQ8NHG7 77 aa5□□□□□ -1.61
ECHDC1-216ENST00000479525 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-216ENST00000479525 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
ECHDC1-216ENST00000479525 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
ECHDC1-216ENST00000479525 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
ECHDC1-216ENST00000479525 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-216ENST00000479525 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
ECHDC1-216ENST00000479525 MT3P25713 68 aa4.76□□□□□ -1.65
ECHDC1-216ENST00000479525 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-216ENST00000479525 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
ECHDC1-216ENST00000479525 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
ECHDC1-216ENST00000479525 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
ECHDC1-216ENST00000479525 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
ECHDC1-216ENST00000479525 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
ECHDC1-216ENST00000479525 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
ECHDC1-216ENST00000479525 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
ECHDC1-216ENST00000479525 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.74
ECHDC1-216ENST00000479525 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
ECHDC1-216ENST00000479525 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
ECHDC1-216ENST00000479525 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
ECHDC1-216ENST00000479525 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
ECHDC1-216ENST00000479525 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
ECHDC1-216ENST00000479525 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
ECHDC1-216ENST00000479525 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
ECHDC1-216ENST00000479525 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
ECHDC1-216ENST00000479525 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
ECHDC1-216ENST00000479525 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
ECHDC1-216ENST00000479525 INE1O15225 51 aa2.9□□□□□ -1.94
ECHDC1-216ENST00000479525 PRM1P04553 51 aa2.73□□□□□ -1.97
ECHDC1-216ENST00000479525 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
ECHDC1-216ENST00000479525 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 145.4 ms