RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
USP11-207ENST00000478596 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
USP11-207ENST00000478596 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
USP11-207ENST00000478596 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
USP11-207ENST00000478596 TNP1P09430 55 aa5.65□□□□□ -1.5
USP11-207ENST00000478596 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
USP11-207ENST00000478596 MT4P47944 62 aa5.61□□□□□ -1.51
USP11-207ENST00000478596 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
USP11-207ENST00000478596 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
USP11-207ENST00000478596 ROMO1P60602 79 aa5.55□□□□□ -1.52
USP11-207ENST00000478596 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
USP11-207ENST00000478596 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
USP11-207ENST00000478596 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
USP11-207ENST00000478596 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
USP11-207ENST00000478596 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
USP11-207ENST00000478596 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
USP11-207ENST00000478596 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
USP11-207ENST00000478596 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
USP11-207ENST00000478596 KRTAP5-4Q6L8H1 288 aa5.36□□□□□ -1.55
USP11-207ENST00000478596 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
USP11-207ENST00000478596 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
USP11-207ENST00000478596 MT1EP04732 61 aa5.3□□□□□ -1.56
USP11-207ENST00000478596 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
USP11-207ENST00000478596 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
USP11-207ENST00000478596 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
USP11-207ENST00000478596 MT1GP13640 62 aa5.2□□□□□ -1.58
USP11-207ENST00000478596 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
USP11-207ENST00000478596 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
USP11-207ENST00000478596 MT1MQ8N339 61 aa5.09□□□□□ -1.59
USP11-207ENST00000478596 MT1LQ93083 61 aa5.08□□□□□ -1.6
USP11-207ENST00000478596 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
USP11-207ENST00000478596 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
USP11-207ENST00000478596 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
USP11-207ENST00000478596 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
USP11-207ENST00000478596 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
USP11-207ENST00000478596 MUC5BQ9HC84 5762 aaPredicted RBP4.94□□□□□ -1.62
USP11-207ENST00000478596 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
USP11-207ENST00000478596 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
USP11-207ENST00000478596 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
USP11-207ENST00000478596 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
USP11-207ENST00000478596 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
USP11-207ENST00000478596 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
USP11-207ENST00000478596 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
USP11-207ENST00000478596 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
USP11-207ENST00000478596 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
USP11-207ENST00000478596 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
USP11-207ENST00000478596 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
USP11-207ENST00000478596 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
USP11-207ENST00000478596 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
USP11-207ENST00000478596 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
USP11-207ENST00000478596 MT1AP04731 61 aa4.33□□□□□ -1.72
USP11-207ENST00000478596 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
USP11-207ENST00000478596 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
USP11-207ENST00000478596 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
USP11-207ENST00000478596 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
USP11-207ENST00000478596 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
USP11-207ENST00000478596 MT3P25713 68 aa3.96□□□□□ -1.78
USP11-207ENST00000478596 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
USP11-207ENST00000478596 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
USP11-207ENST00000478596 H3BS24 57 aa3.69□□□□□ -1.82
USP11-207ENST00000478596 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
USP11-207ENST00000478596 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
USP11-207ENST00000478596 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
USP11-207ENST00000478596 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
USP11-207ENST00000478596 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
USP11-207ENST00000478596 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
USP11-207ENST00000478596 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
USP11-207ENST00000478596 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
USP11-207ENST00000478596 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
USP11-207ENST00000478596 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
USP11-207ENST00000478596 INE1O15225 51 aa3.17□□□□□ -1.9
USP11-207ENST00000478596 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
USP11-207ENST00000478596 PRM1P04553 51 aa2.87□□□□□ -1.95
USP11-207ENST00000478596 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
USP11-207ENST00000478596 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
USP11-207ENST00000478596 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
USP11-207ENST00000478596 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
USP11-207ENST00000478596 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 134 ms