RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LCE3BQ5TA77 95 aa9.89□□□□□ -0.83
CCM2-211ENST00000478582 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
CCM2-211ENST00000478582 GPR98Q8WXG9 6306 aa9.75□□□□□ -0.85
CCM2-211ENST00000478582 KRTAP19-3Q7Z4W3 81 aa9.73□□□□□ -0.85
CCM2-211ENST00000478582 LCE5AQ5TCM9 118 aa9.71□□□□□ -0.86
CCM2-211ENST00000478582 ROMO1P60602 79 aa9.61□□□□□ -0.87
CCM2-211ENST00000478582 KRTAP23-1A1A580 65 aa9.58□□□□□ -0.88
CCM2-211ENST00000478582 MT1GP13640 62 aa9.58□□□□□ -0.88
CCM2-211ENST00000478582 KRTAP12-3P60328 96 aa9.57□□□□□ -0.88
CCM2-211ENST00000478582 MT1LQ93083 61 aa9.57□□□□□ -0.88
CCM2-211ENST00000478582 DSTQ03001 7570 aaKnown RBP9.52□□□□□ -0.89
CCM2-211ENST00000478582 PP632Q6XCG6 107 aa9.47□□□□□ -0.89
CCM2-211ENST00000478582 MT1MQ8N339 61 aa9.4□□□□□ -0.9
CCM2-211ENST00000478582 BRK1Q8WUW1 75 aa9.34□□□□□ -0.91
CCM2-211ENST00000478582 KRTAP4-9Q9BYQ8 210 aa9.18□□□□□ -0.94
CCM2-211ENST00000478582 KRTAP19-4Q3LI73 84 aa9.16□□□□□ -0.94
CCM2-211ENST00000478582 KRTAP15-1Q3LI76 137 aa9.13□□□□□ -0.95
CCM2-211ENST00000478582 KRTAP4-3Q9BYR4 195 aa9.13□□□□□ -0.95
CCM2-211ENST00000478582 KRTAP4-7Q9BYR0 210 aa9.09□□□□□ -0.95
CCM2-211ENST00000478582 LCE4AQ5TA78 99 aa9.02□□□□□ -0.97
CCM2-211ENST00000478582 LCE1DQ5T752 114 aa8.98□□□□□ -0.97
CCM2-211ENST00000478582 MT4P47944 62 aa8.87□□□□□ -0.99
CCM2-211ENST00000478582 LCE3CQ5T5A8 94 aa8.87□□□□□ -0.99
CCM2-211ENST00000478582 KRTAP5-4Q6L8H1 288 aa8.85□□□□□ -0.99
CCM2-211ENST00000478582 PMAIP1Q13794 54 aa8.83□□□□□ -1
CCM2-211ENST00000478582 HMCN1Q96RW7 5635 aa8.81□□□□□ -1
CCM2-211ENST00000478582 AHNAK2Q8IVF2 5795 aa8.73□□□□□ -1.01
CCM2-211ENST00000478582 KRTAP4-6Q9BYQ5 205 aa8.65□□□□□ -1.02
CCM2-211ENST00000478582 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
CCM2-211ENST00000478582 KRTAP5-10Q6L8G5 202 aa8.61□□□□□ -1.03
CCM2-211ENST00000478582 KRTAP5-5Q701N2 237 aaPredicted RBP8.6□□□□□ -1.03
CCM2-211ENST00000478582 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
CCM2-211ENST00000478582 KRTAP5-7Q6L8G8 165 aa8.39□□□□□ -1.07
CCM2-211ENST00000478582 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
CCM2-211ENST00000478582 KRTAP9-6A8MVA2 160 aa8.35□□□□□ -1.07
CCM2-211ENST00000478582 KRTAP20-2Q3LI61 65 aa8.34□□□□□ -1.07
CCM2-211ENST00000478582 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
CCM2-211ENST00000478582 KRTAP12-4P60329 112 aa8.3□□□□□ -1.08
CCM2-211ENST00000478582 KRTAP5-3Q6L8H2 238 aa8.22□□□□□ -1.09
CCM2-211ENST00000478582 SYNE1Q8NF91 8797 aaKnown RBP8.21□□□□□ -1.1
CCM2-211ENST00000478582 MT1AP04731 61 aa8.15□□□□□ -1.1
CCM2-211ENST00000478582 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
CCM2-211ENST00000478582 KRTAP6-1Q3LI64 71 aa8.05□□□□□ -1.12
CCM2-211ENST00000478582 KRTAP9-4Q9BYQ2 154 aa7.84□□□□□ -1.15
CCM2-211ENST00000478582 KRTAP5-2Q701N4 177 aa7.76□□□□□ -1.17
CCM2-211ENST00000478582 SVIPQ8NHG7 77 aa7.66□□□□□ -1.18
CCM2-211ENST00000478582 KRTAP4-11Q9BYQ6 195 aa7.61□□□□□ -1.19
CCM2-211ENST00000478582 KRTAP6-2Q3LI66 62 aa7.59□□□□□ -1.19
CCM2-211ENST00000478582 AHNAKQ09666 5890 aaKnown RBP7.5□□□□□ -1.21
CCM2-211ENST00000478582 MT3P25713 68 aa7.44□□□□□ -1.22
CCM2-211ENST00000478582 MUC5ACP98088 5654 aa7.41□□□□□ -1.22
CCM2-211ENST00000478582 KRTAP5-8O75690 187 aa7.35□□□□□ -1.23
CCM2-211ENST00000478582 MUC5BQ9HC84 5762 aaPredicted RBP7.35□□□□□ -1.23
CCM2-211ENST00000478582 OBSCNQ5VST9 7968 aa7.28□□□□□ -1.24
CCM2-211ENST00000478582 LUZP6Q538Z0 58 aa7□□□□□ -1.29
CCM2-211ENST00000478582 KRTAP9-9Q9BYP9 154 aa6.98□□□□□ -1.29
CCM2-211ENST00000478582 KRTAP5-1Q6L8H4 278 aa6.95□□□□□ -1.3
CCM2-211ENST00000478582 LCE1EQ5T753 118 aa6.74□□□□□ -1.33
CCM2-211ENST00000478582 LCE3DQ9BYE3 92 aa6.5□□□□□ -1.37
CCM2-211ENST00000478582 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
CCM2-211ENST00000478582 KRTAP4-2Q9BYR5 136 aa6.3□□□□□ -1.4
CCM2-211ENST00000478582 LCE1BQ5T7P3 118 aa6.27□□□□□ -1.41
CCM2-211ENST00000478582 LCE1CQ5T751 118 aa6.24□□□□□ -1.41
CCM2-211ENST00000478582 LCE3EQ5T5B0 92 aa6.2□□□□□ -1.42
CCM2-211ENST00000478582 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
CCM2-211ENST00000478582 H3BS24 57 aa5.98□□□□□ -1.45
CCM2-211ENST00000478582 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.77□□□□□ -1.49
CCM2-211ENST00000478582 KRTAP5-11Q6L8G4 156 aa5.61□□□□□ -1.51
CCM2-211ENST00000478582 LCE1FQ5T754 118 aa5.46□□□□□ -1.54
CCM2-211ENST00000478582 KRTAP21-2Q3LI59 83 aa5.32□□□□□ -1.56
CCM2-211ENST00000478582 PHGR1C9JFL3 82 aa5.09□□□□□ -1.59
CCM2-211ENST00000478582 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
CCM2-211ENST00000478582 INE1O15225 51 aa5.02□□□□□ -1.61
CCM2-211ENST00000478582 PRM1P04553 51 aa4.92□□□□□ -1.62
CCM2-211ENST00000478582 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
CCM2-211ENST00000478582 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
CCM2-211ENST00000478582 KRTAP21-1Q3LI58 79 aa3.89□□□□□ -1.79
CCM2-211ENST00000478582 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 15.1 ms